RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 COG5Q9UP83 839 aa21.63■■□□□ 1.05
TM6SF1-201ENST00000258909 ENPP3O14638 875 aa21.62■■□□□ 1.05
TM6SF1-201ENST00000258909 CYP3A4P08684 503 aa21.62■■□□□ 1.05
TM6SF1-201ENST00000258909 PDIA3P30101 505 aaKnown RBP21.62■■□□□ 1.05
TM6SF1-201ENST00000258909 CCDC60Q8IWA6 550 aaPredicted RBP21.62■■□□□ 1.05
TM6SF1-201ENST00000258909 LARP6Q9BRS8 491 aaKnown RBP21.62■■□□□ 1.05
TM6SF1-201ENST00000258909 PCDHA2Q9Y5H9 948 aa21.62■■□□□ 1.05
TM6SF1-201ENST00000258909 IGKV6D-21A0A0A0MT36 114 aa21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 IPO5O00410 1097 aaKnown RBP21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 IER5Q5VY09 327 aa21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 MTHFD1LQ6UB35 978 aa21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 TSHZ1Q6ZSZ6 1077 aa21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 TMEM192Q8IY95 271 aa21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 TNPO1Q92973 898 aaKnown RBP21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 IL17RAQ96F46 866 aa21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 ZNF577Q9BSK1 485 aa21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 VPS54Q9P1Q0 977 aa21.61■■□□□ 1.05
TM6SF1-201ENST00000258909 GNA11P29992 359 aa21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 MYO7AQ13402 2215 aa21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 TOB2Q14106 344 aaPredicted RBP21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 SWSAP1Q6NVH7 229 aa21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 RUFY3Q7L099 469 aa21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 TRMT1LQ7Z2T5 733 aaKnown RBP21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 EVPLQ92817 2033 aa21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 RNF26Q9BY78 433 aaPredicted RBP21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 ZNF302Q9NR11 478 aa21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 TRPV2Q9Y5S1 764 aa21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 TTC3P53804 2025 aa21.6■■□□□ 1.05
TM6SF1-201ENST00000258909 IFNAR1P17181 557 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 KLRC1P26715 233 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 GPM6BQ13491 265 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 PRR16Q569H4 304 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 FAM160B1Q5W0V3 765 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 MIS18BP1Q6P0N0 1132 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 PDXDC2PQ6P474 469 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 LINC01599Q8WXQ3 324 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 SAMD11Q96NU1 681 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 ZSWIM6Q9HCJ5 1215 aa21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 MYH9P35579 1960 aaKnown RBP21.59■■□□□ 1.05
TM6SF1-201ENST00000258909 M0QZ92 97 aa21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 ATP4AP20648 1035 aa21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 SLC26A2P50443 739 aa21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 EVCP57679 992 aa21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 RTN4RL1Q86UN2 441 aaPredicted RBP21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 FIBCD1Q8N539 461 aa21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 ATP8B4Q8TF62 1192 aa21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 CELF4Q9BZC1 486 aaKnown RBP21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 GINS2Q9Y248 185 aa21.58■■□□□ 1.05
TM6SF1-201ENST00000258909 SMIM35A0A1B0GVV1 85 aa21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 H3BNC9 293 aa21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 HBP1O60381 514 aa21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 RPLP2P05387 115 aaKnown RBP21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 TMEM266Q2M3C6 531 aa21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 MCTP2Q6DN12 878 aa21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 CKAP2LQ8IYA6 745 aa21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 MRPL38Q96DV4 380 aaKnown RBP21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 UPF3BQ9BZI7 483 aaKnown RBP21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 PADI3Q9ULW8 664 aa21.58■■□□□ 1.04
TM6SF1-201ENST00000258909 RALGAPA2Q2PPJ7 1873 aa21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 COL4A6Q14031 1691 aa21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 EDIL3O43854 480 aa21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 SETQ01105 290 aaPredicted RBP21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 KRT76Q01546 638 aa21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 CCDC148Q8NFR7 591 aa21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 BICD2Q8TD16 824 aa21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 TBC1D22BQ9NU19 505 aa21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 CYP46A1Q9Y6A2 500 aa21.57■■□□□ 1.04
TM6SF1-201ENST00000258909 ADGRA3Q8IWK6 1321 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 IGSF9BQ9UPX0 1349 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 ZBTB42B2RXF5 422 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 IBSPP21815 317 aaPredicted RBP21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 CTNNB1P35222 781 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 NLRP5P59047 1200 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 PAK2Q13177 524 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 STK3Q13188 491 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 PTPROQ16827 1216 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 NME8Q8N427 588 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 LENG9Q96B70 501 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 PPP1R16BQ96T49 567 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 UBE2ZQ9H832 354 aaPredicted RBP21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 CDHR5Q9HBB8 845 aa21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 RC3H2Q9HBD1 1191 aaKnown RBP21.56■■□□□ 1.04
TM6SF1-201ENST00000258909 WDR81Q562E7 1941 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 LINC00271P0C7V0 271 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 CIITAP33076 1130 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 BTG3Q14201 252 aaPredicted RBP21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 ZNF484Q5JVG2 852 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 ZNF746Q6NUN9 644 aaPredicted RBP21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 KIAA0319LQ8IZA0 1049 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 GABBR1Q9UBS5 961 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 TCEAL9Q9UHQ7 104 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 SAMM50Q9Y512 469 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 MAFBQ9Y5Q3 323 aaPredicted RBP21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 SQORQ9Y6N5 450 aa21.55■■□□□ 1.04
TM6SF1-201ENST00000258909 DGKIO75912 1065 aa21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 KCNA5P22460 613 aa21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 SSRP1Q08945 709 aaKnown RBP21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 NFX1Q12986 1120 aaKnown RBP21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 GJA10Q969M2 543 aa21.54■■□□□ 1.04
TM6SF1-201ENST00000258909 ZNF689Q96CS4 500 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms