RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 TRIM59Q8IWR1 403 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 NEK9Q8TD19 979 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 CRNKL1Q9BZJ0 848 aaKnown RBP12.52□□□□□ -0.4
TROAP-201ENST00000257909 GANQ9H2C0 597 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 DPH5Q9H2P9 285 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 PABPC3Q9H361 631 aaKnown RBP12.52□□□□□ -0.4
TROAP-201ENST00000257909 ATP8A2Q9NTI2 1148 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 PANK4Q9NVE7 773 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 TTC7AQ9ULT0 858 aaPredicted RBP12.52□□□□□ -0.4
TROAP-201ENST00000257909 CORO1CQ9ULV4 474 aaPredicted RBP12.52□□□□□ -0.4
TROAP-201ENST00000257909 A0A0A6YYK5 440 aaPredicted RBP12.52□□□□□ -0.41
TROAP-201ENST00000257909 SMNDC1O75940 238 aaKnown RBP eCLIP12.52□□□□□ -0.41
TROAP-201ENST00000257909 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.41
TROAP-201ENST00000257909 AGTP01019 485 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 ITGA4P13612 1032 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 GNA11P29992 359 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 EPS15P42566 896 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 PTK2Q05397 1052 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 DENND2CQ68D51 928 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 ZNF34Q8IZ26 560 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 PROCA1Q8NCQ7 364 aaPredicted RBP12.52□□□□□ -0.41
TROAP-201ENST00000257909 RAD54LQ92698 747 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 CNKSR1Q969H4 720 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 ANKRD27Q96NW4 1050 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 RAB34Q9BZG1 259 aa12.52□□□□□ -0.41
TROAP-201ENST00000257909 STMN4Q9H169 189 aaPredicted RBP12.52□□□□□ -0.41
TROAP-201ENST00000257909 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 RGS16O15492 202 aaPredicted RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 FLOT1O75955 427 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 VIMP08670 466 aaKnown RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 PDE6CP51160 858 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 PMS2P54278 862 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 NPEPPSP55786 919 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 POU5F1Q01860 360 aaKnown RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 CHRNDQ07001 517 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 TMEM266Q2M3C6 531 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 C6orf118Q5T5N4 469 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 MIS18BP1Q6P0N0 1132 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 COL23A1Q86Y22 540 aaPredicted RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 PIGBQ92521 554 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 DDX12PQ92771 950 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 ZNF570Q96NI8 536 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 PNMA5Q96PV4 448 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 ADAM7Q9H2U9 754 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 C6orf50Q9HD87 102 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 DCP1AQ9NPI6 582 aaPredicted RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 SLC5A4Q9NY91 659 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 NAGPAQ9UK23 515 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 DIAPH2O60879 1101 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
TROAP-201ENST00000257909 NCALDP61601 193 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 ADCY2Q08462 1091 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 LRRC41Q15345 812 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 ALKBH5Q6P6C2 394 aaKnown RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 IRF2BP2Q7Z5L9 587 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 ATP8B4Q8TF62 1192 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 IFT74Q96LB3 600 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 PRMT1Q99873 361 aaKnown RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 GOLPH3Q9H4A6 298 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 KIF9Q9HAQ2 790 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 LRRC4CQ9HCJ2 640 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 CNOT7Q9UIV1 285 aaKnown RBP12.51□□□□□ -0.41
TROAP-201ENST00000257909 INTUQ9ULD6 942 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
TROAP-201ENST00000257909 CYTH3O43739 400 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 RARAP10276 462 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 TXKP42681 527 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 ALDH5A1P51649 535 aaPredicted RBP12.5□□□□□ -0.41
TROAP-201ENST00000257909 NAPAP54920 295 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 ZNF571Q7Z3V5 609 aaPredicted RBP12.5□□□□□ -0.41
TROAP-201ENST00000257909 DAAM2Q86T65 1068 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 MICAL1Q8TDZ2 1067 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 HES6Q96HZ4 224 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 NAP1L3Q99457 506 aaPredicted RBP12.5□□□□□ -0.41
TROAP-201ENST00000257909 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 AGAP1Q9UPQ3 857 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 FAM187AA6NFU0 413 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 SNX3O60493 162 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 UBOX5O94941 541 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 CCNG1P51959 295 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 PTENP60484 403 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 KCNJ2P63252 427 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 CLUL1Q15846 466 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 GALNTL6Q49A17 601 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 AP1ARQ63HQ0 302 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 DUPD1Q68J44 220 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 FAM43BQ6ZT52 329 aaPredicted RBP12.5□□□□□ -0.41
TROAP-201ENST00000257909 NT5DC3Q86UY8 548 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 VPS36Q86VN1 386 aa12.5□□□□□ -0.41
TROAP-201ENST00000257909 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms