RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 SALL4Q9UJQ4 1053 aa17.28■□□□□ 0.36
SLC6A8-201ENST00000253122 LEMD3Q9Y2U8 911 aa17.28■□□□□ 0.36
SLC6A8-201ENST00000253122 GLI3P10071 1580 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 CCDC188H7C350 402 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 ITIH3Q06033 890 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 KIF2BQ8N4N8 673 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 CPSF2Q9P2I0 782 aaKnown RBP17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 HDAC9Q9UKV0 1011 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 MYH8P13535 1937 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 C7orf25Q9BPX7 421 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 KLHL14Q9P2G3 628 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 L3MBTL1Q9Y468 752 aa17.27■□□□□ 0.36
SLC6A8-201ENST00000253122 CAMTA2O94983 1202 aa17.27■□□□□ 0.35
SLC6A8-201ENST00000253122 SESN3P58005 492 aa17.27■□□□□ 0.35
SLC6A8-201ENST00000253122 CDK17Q00537 523 aa17.27■□□□□ 0.35
SLC6A8-201ENST00000253122 NAIF1Q69YI7 327 aaPredicted RBP17.27■□□□□ 0.35
SLC6A8-201ENST00000253122 TMED8Q6PL24 325 aaPredicted RBP17.27■□□□□ 0.35
SLC6A8-201ENST00000253122 LINC00116Q8NCU8 138 aa17.27■□□□□ 0.35
SLC6A8-201ENST00000253122 TBK1Q9UHD2 729 aa17.27■□□□□ 0.35
SLC6A8-201ENST00000253122 CCT8L1PA6NM43 557 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 RASGRF2O14827 1237 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 CDC25CP30307 473 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 ANKRD20A8PQ5CZ79 823 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 FIGNQ5HY92 759 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 AP1ARQ63HQ0 302 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 SETDB2Q96T68 719 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 PRMT1Q99873 361 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 MYH10P35580 1976 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 TDP2O95551 362 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 RFC4P35249 363 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 EIF3BP55884 814 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 TAF11Q15544 211 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 LRRC47Q8N1G4 583 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 KIAA0895Q8NCT3 520 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 ERMNQ8TAM6 284 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 NLRP3Q96P20 1036 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 F8W031 263 aaPredicted RBP17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 KLRC4O43908 158 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 MRPL12P52815 198 aaKnown RBP17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.352e-8■□□□□ 10.6
SLC6A8-201ENST00000253122 ITGB3BPQ13352 177 aaPredicted RBP17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 MIIPQ5JXC2 388 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 UBL4BQ8N7F7 174 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 GDF3Q9NR23 364 aa17.26■□□□□ 0.35
SLC6A8-201ENST00000253122 ACSL3O95573 720 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 ITGA4P13612 1032 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 BIRC2Q13490 618 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 ZRSR2Q15696 482 aaKnown RBP17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 PREPLQ4J6C6 727 aaPredicted RBP17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 LRIG3Q6UXM1 1119 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 LMNTD2Q8IXW0 634 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 METTL13Q8N6R0 699 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 BARHL2Q9NY43 387 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 DDX25Q9UHL0 483 aaKnown RBP17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 PVALEFA0A1B0GWK0 134 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 MEIS1O00470 390 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 FAM13AO94988 1023 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 EVX2Q03828 476 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 ZNF844Q08AG5 666 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 CETN1Q12798 172 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 COASYQ13057 564 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 UBE2SQ16763 222 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 QPCTQ16769 361 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 HS2ST1Q7LGA3 356 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 NBPF5PQ86XG9 351 aaPredicted RBP17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 CUL5Q93034 780 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 STAMBPL1Q96FJ0 436 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 CCDC77Q9BR77 488 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 TCEAL9Q9UHQ7 104 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 E9PMD0 336 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 LRRN2O75325 713 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 CYP4A11Q02928 519 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 PLCB4Q15147 1175 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 MIEF2Q96C03 454 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 SH3GLB2Q9NR46 395 aa17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 BZW2Q9Y6E2 419 aaKnown RBP17.25■□□□□ 0.35
SLC6A8-201ENST00000253122 PMS2P54278 862 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 PTK2Q05397 1052 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 CLEC4GQ6UXB4 293 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 SAAL1Q96ER3 474 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 TMEM47Q9BQJ4 181 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 AFPP02771 609 aaKnown RBP17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 GBP1P32455 592 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 MESDQ14696 234 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 CAND2O75155 1236 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 SLC9A1P19634 815 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 CAPRIN2Q6IMN6 1127 aaKnown RBP17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 GLG1Q92896 1179 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 GCNT4Q9P109 453 aa17.24■□□□□ 0.35
SLC6A8-201ENST00000253122 H0Y3Z8 333 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 CALUO43852 315 aaPredicted RBP17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 RPS6KA4O75676 772 aa17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 HSPA9P38646 679 aaKnown RBP17.23■□□□□ 0.35
SLC6A8-201ENST00000253122 MXRA7P84157 204 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms