RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 HDLBPQ00341 1268 aaKnown RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 ZC2HC1CQ53FD0 456 aaPredicted RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 C6orf163Q5TEZ5 329 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 CCDC13Q8IYE1 715 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 LARGE2Q8N3Y3 721 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 RNPC3Q96LT9 517 aaKnown RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 CAPN6Q9Y6Q1 641 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 GFPT2O94808 682 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 ALAS1P13196 640 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 MUM1Q2TAK8 710 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 NAIF1Q69YI7 327 aaPredicted RBP12.54□□□□□ -0.4
SOX9-201ENST00000245479 ZNF746Q6NUN9 644 aaPredicted RBP12.54□□□□□ -0.4
SOX9-201ENST00000245479 DPH6Q7L8W6 267 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 SEMA6BQ9H3T3 888 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 FAM53CQ9NYF3 392 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 SNX12Q9UMY4 172 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 C5P01031 1676 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
SOX9-201ENST00000245479 RPS6KA5O75582 802 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 TRIM49P0CI25 452 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 TRIM49CP0CI26 452 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 CRKP46108 304 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 KCNA1Q09470 495 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 ABCB5Q2M3G0 1257 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 CDC42EP5Q6NZY7 148 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 RTFDC1Q9BY42 306 aaPredicted RBP12.54□□□□□ -0.4
SOX9-201ENST00000245479 JMJD4Q9H9V9 463 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.54□□□□□ -0.41e-12■■□□□ 12.8
SOX9-201ENST00000245479 HOMER3Q9NSC5 361 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 USP20Q9Y2K6 914 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 F5H6K3 240 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 GYS1P13807 737 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 IRX1P78414 480 aaPredicted RBP12.54□□□□□ -0.4
SOX9-201ENST00000245479 KLRC3Q07444 240 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 GNPTABQ3T906 1256 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 SWT1Q5T5J6 900 aaKnown RBP12.54□□□□□ -0.4
SOX9-201ENST00000245479 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 NEDD1Q8NHV4 660 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 LRRC15Q8TF66 581 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 STMN2Q93045 179 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 IQCDQ96DY2 449 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 RAB17Q9H0T7 212 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 DNAJC17Q9NVM6 304 aaKnown RBP12.54□□□□□ -0.4
SOX9-201ENST00000245479 KLHL14Q9P2G3 628 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 RNF14Q9UBS8 474 aa12.54□□□□□ -0.4
SOX9-201ENST00000245479 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
SOX9-201ENST00000245479 SLC9A1P19634 815 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 PRPHP41219 470 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 MAGOHP61326 146 aaKnown RBP12.53□□□□□ -0.4
SOX9-201ENST00000245479 DGKZQ13574 1117 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 VWA3BQ502W6 1294 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 FBXO11Q86XK2 927 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 MAGOHBQ96A72 148 aaKnown RBP12.53□□□□□ -0.4
SOX9-201ENST00000245479 SLIT3O75094 1523 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 PSMD14O00487 310 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 EXOC3O60645 756 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
SOX9-201ENST00000245479 SUN1O94901 812 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 NMT1P30419 496 aaKnown RBP12.53□□□□□ -0.4
SOX9-201ENST00000245479 FBXL16Q8N461 479 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 NAP1L3Q99457 506 aaPredicted RBP12.53□□□□□ -0.4
SOX9-201ENST00000245479 STX2P32856 288 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 COASYQ13057 564 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 IRF2BP1Q8IU81 584 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 ANO3Q9BYT9 981 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 ANAPC4Q9UJX5 808 aa12.53□□□□□ -0.4
SOX9-201ENST00000245479 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.4
SOX9-201ENST00000245479 TMEM150BA6NC51 233 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 H0YIN7 160 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.4
SOX9-201ENST00000245479 SLCO1A2P46721 670 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 ZNF131P52739 623 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 POLE2P56282 527 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 GLE1Q53GS7 698 aaKnown RBP12.52□□□□□ -0.4
SOX9-201ENST00000245479 FAM83BQ5T0W9 1011 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 ARL6IP4Q66PJ3 421 aaKnown RBP12.52□□□□□ -0.4
SOX9-201ENST00000245479 CYB5D1Q6P9G0 228 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 TRAPPC11Q7Z392 1133 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 GJD4Q96KN9 370 aaPredicted RBP12.52□□□□□ -0.4
SOX9-201ENST00000245479 TSC22D3Q99576 134 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 TRIM4Q9C037 500 aa12.52□□□□□ -0.4
SOX9-201ENST00000245479 ARMCX3Q9UH62 379 aaPredicted RBP12.52□□□□□ -0.4
SOX9-201ENST00000245479 MRC1P22897 1456 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 ZNF211Q13398 564 aaPredicted RBP12.52□□□□□ -0.41
SOX9-201ENST00000245479 ECM1Q16610 540 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 PPP1R18Q6NYC8 613 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.41
SOX9-201ENST00000245479 CERS5Q8N5B7 392 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 ZNF277Q9NRM2 450 aaPredicted RBP12.52□□□□□ -0.41
SOX9-201ENST00000245479 MYH2Q9UKX2 1941 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 PALMO75781 387 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 FLOT1O75955 427 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 PAX7P23759 505 aa12.52□□□□□ -0.41
SOX9-201ENST00000245479 CARSP49589 748 aaKnown RBP12.52□□□□□ -0.41
SOX9-201ENST00000245479 GRB10Q13322 594 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms