RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ACTN2P35609 894 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 CCDC70Q6NSX1 233 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 RINT1Q6NUQ1 792 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 RUBCNQ92622 972 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 CCDC102AQ96A19 550 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 TSPYL1Q9H0U9 437 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 NLRC4Q9NPP4 1024 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 TYW1Q9NV66 732 aaKnown RBP24.09■■□□□ 1.45
RNF39-201ENST00000244360 ZNRF3Q9ULT6 936 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 CAPN6Q9Y6Q1 641 aa24.09■■□□□ 1.45
RNF39-201ENST00000244360 SRGAP2O75044 1071 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 SLITRK3O94933 977 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 GYS2P54840 703 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 KCNH2Q12809 1159 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 SLC9C1Q4G0N8 1177 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 CAGE1Q8TC20 777 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 PDGFDQ9GZP0 370 aaPredicted RBP24.08■■□□□ 1.45
RNF39-201ENST00000244360 ASTN1O14525 1302 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 MAGEA1P43355 309 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 PRELPP51888 382 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 POLR2FP61218 127 aaKnown RBP24.08■■□□□ 1.45
RNF39-201ENST00000244360 CEP55Q53EZ4 464 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 DPY19L2P1Q6NXN4 242 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 MLXIPQ9HAP2 919 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.08■■□□□ 1.45
RNF39-201ENST00000244360 FAN1Q9Y2M0 1017 aa24.08■■□□□ 1.45
RNF39-201ENST00000244360 LRRIQ3A6PVS8 624 aaPredicted RBP24.07■■□□□ 1.44
RNF39-201ENST00000244360 SLC16A3O15427 465 aaKnown RBP24.07■■□□□ 1.44
RNF39-201ENST00000244360 PRPF6O94906 941 aaKnown RBP24.07■■□□□ 1.44
RNF39-201ENST00000244360 DPEP1P16444 411 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 CRACR2AQ9BSW2 395 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 AIPL1Q9NZN9 384 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 ARMCX3Q9UH62 379 aaPredicted RBP24.07■■□□□ 1.44
RNF39-201ENST00000244360 SNX12Q9UMY4 172 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 IVLP07476 585 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 PRLRP16471 622 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 ITIH3Q06033 890 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 CTTNQ14247 550 aaKnown RBP24.07■■□□□ 1.44
RNF39-201ENST00000244360 B3GNT9Q6UX72 402 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 C1orf186Q6ZWK4 172 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 LDHDQ86WU2 507 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 DYDC2Q96IM9 177 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 PLCB1Q9NQ66 1216 aa24.07■■□□□ 1.44
RNF39-201ENST00000244360 EIF3DO15371 548 aaKnown RBP eCLIP24.06■■□□□ 1.44
RNF39-201ENST00000244360 RPS6KA5O75582 802 aa24.06■■□□□ 1.44
RNF39-201ENST00000244360 PTGER2P43116 358 aa24.06■■□□□ 1.44
RNF39-201ENST00000244360 SETQ01105 290 aaPredicted RBP24.06■■□□□ 1.44
RNF39-201ENST00000244360 GFPT1Q06210 699 aaPredicted RBP24.06■■□□□ 1.44
RNF39-201ENST00000244360 MIGA2Q7L4E1 593 aa24.06■■□□□ 1.44
RNF39-201ENST00000244360 TDRD12Q587J7 1177 aaKnown RBP24.06■■□□□ 1.44
RNF39-201ENST00000244360 ZNF572Q7Z3I7 529 aaPredicted RBP24.06■■□□□ 1.44
RNF39-201ENST00000244360 NIM1KQ8IY84 436 aa24.06■■□□□ 1.44
RNF39-201ENST00000244360 GLIS2Q9BZE0 524 aaPredicted RBP24.06■■□□□ 1.44
RNF39-201ENST00000244360 WDR11Q9BZH6 1224 aa24.06■■□□□ 1.44
RNF39-201ENST00000244360 FBXO28Q9NVF7 368 aa24.06■■□□□ 1.44
RNF39-201ENST00000244360 FRMPD4Q14CM0 1322 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 GAS7O60861 476 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 N4BP1O75113 896 aaKnown RBP24.05■■□□□ 1.44
RNF39-201ENST00000244360 MOCS3O95396 460 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 AFPP02771 609 aaKnown RBP24.05■■□□□ 1.44
RNF39-201ENST00000244360 NR3C1P04150 777 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 ASNSP08243 561 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 RPL13P26373 211 aaKnown RBP24.05■■□□□ 1.44
RNF39-201ENST00000244360 EPS15P42566 896 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 ZYXQ15942 572 aaKnown RBP24.05■■□□□ 1.44
RNF39-201ENST00000244360 NFIL3Q16649 462 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 PIGOQ8TEQ8 1089 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 CAPZA3Q96KX2 299 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 ALS2CR12Q96Q35 445 aa24.05■■□□□ 1.44
RNF39-201ENST00000244360 METTL14Q9HCE5 456 aaKnown RBP24.05■■□□□ 1.44
RNF39-201ENST00000244360 AKAP3O75969 853 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 HSD17B4P51659 736 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 APBA1Q02410 837 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 SLC30A10Q6XR72 485 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 RNF10Q8N5U6 811 aaKnown RBP24.04■■□□□ 1.44
RNF39-201ENST00000244360 GOLGA6L1Q8N7Z2 621 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 JADE2Q9NQC1 790 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 PDE2AO00408 941 aaPredicted RBP24.04■■□□□ 1.44
RNF39-201ENST00000244360 GCNT3O95395 438 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 CAPN2P17655 700 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 GPIHBP1Q8IV16 184 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 TPH2Q8IWU9 490 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 COG1Q8WTW3 980 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 BCAS3Q9H6U6 928 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 SALL4Q9UJQ4 1053 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 ZMYM2Q9UBW7 1377 aa24.04■■□□□ 1.44
RNF39-201ENST00000244360 POLD1P28340 1107 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 TNNT3P45378 269 aaPredicted RBP24.03■■□□□ 1.44
RNF39-201ENST00000244360 ZNF131P52739 623 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 EPHA7Q15375 998 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 UNC45AQ9H3U1 944 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 KCND2Q9NZV8 630 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 SEL1LQ9UBV2 794 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 HPCAL4Q9UM19 191 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 ZNF185O15231 689 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 TGFB1I1O43294 461 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 CHMP2AO43633 222 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 FAM13AO94988 1023 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 ICAM1P05362 532 aa24.03■■□□□ 1.44
RNF39-201ENST00000244360 XRCC5P13010 732 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms