RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 SIPA1L1O43166 1804 aa21.73■■□□□ 1.07
HOXC13-201ENST00000243056 COBLO75128 1261 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 CARSP49589 748 aaKnown RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 RASA3Q14644 834 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 USP17L2Q6R6M4 530 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 SRBD1Q8N5C6 995 aaKnown RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 PLEKHG4BQ96PX9 1271 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 SPDYE5A6NIY4 337 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 POLR2DO15514 142 aaKnown RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 ALADP13716 330 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 ZNF280AP59817 542 aaPredicted RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 CERKLQ49MI3 558 aaPredicted RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 RBM12BQ8IXT5 1001 aaKnown RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 SPICE1Q8N0Z3 855 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 C1orf131Q8NDD1 294 aaKnown RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 ALG1Q9BT22 464 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 DHX36Q9H2U1 1008 aaKnown RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 KCNMB3Q9NPA1 279 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 PICK1Q9NRD5 415 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 SNX12Q9UMY4 172 aa21.72■■□□□ 1.07
HOXC13-201ENST00000243056 V9GY48 417 aaPredicted RBP21.72■■□□□ 1.07
HOXC13-201ENST00000243056 ENTPD3O75355 529 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 ITIH3Q06033 890 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 SEPT2Q15019 361 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 KRT31Q15323 416 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 SLC35G1Q2M3R5 365 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 DGKHQ86XP1 1220 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 ATL2Q8NHH9 583 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 ZFAND2BQ8WV99 257 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 RBM41Q96IZ5 413 aaKnown RBP21.71■■□□□ 1.07
HOXC13-201ENST00000243056 MTMR4Q9NYA4 1195 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 HACL1Q9UJ83 578 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 BLOC1S6Q9UL45 172 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 SLC12A4Q9UP95 1085 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 ZSCAN5CA6NGD5 496 aaPredicted RBP21.71■■□□□ 1.07
HOXC13-201ENST00000243056 PHF20L1A8MW92 1017 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 TUBP50607 506 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 GUCY2FP51841 1108 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 HIRAP54198 1017 aaPredicted RBP21.71■■□□□ 1.07
HOXC13-201ENST00000243056 RAPGEF5Q92565 580 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 SHISA4Q96DD7 197 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 TMBIM4Q9HC24 238 aa21.71■■□□□ 1.07
HOXC13-201ENST00000243056 ESYT3A0FGR9 886 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 GKAP1Q5VSY0 366 aaPredicted RBP21.7■■□□□ 1.06
HOXC13-201ENST00000243056 FAM151AQ8WW52 585 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 MTA3Q9BTC8 594 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 VPS16Q9H269 839 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.7■■□□□ 1.06
HOXC13-201ENST00000243056 KCNJ14Q9UNX9 436 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 FRMPD2Q68DX3 1309 aaPredicted RBP21.7■■□□□ 1.06
HOXC13-201ENST00000243056 MACROD2A1Z1Q3 448 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 CCT8L1PA6NM43 557 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 N4BP3O15049 544 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 VAV2P52735 878 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 SSRP1Q08945 709 aaKnown RBP21.7■■□□□ 1.06
HOXC13-201ENST00000243056 FUT2Q10981 343 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 PAK2Q13177 524 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 ERICH1Q86X53 443 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 SMYD4Q8IYR2 804 aaPredicted RBP21.7■■□□□ 1.06
HOXC13-201ENST00000243056 MTMR14Q8NCE2 650 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 ARHGEF10LQ9HCE6 1279 aa21.7■■□□□ 1.06
HOXC13-201ENST00000243056 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.7■■□□□ 1.06
HOXC13-201ENST00000243056 USP17L5A8MUK1 530 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 KRT86O43790 486 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 GH2P01242 217 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 IFNAR1P17181 557 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 MREGQ8N565 214 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 ARFGAP2Q8N6H7 521 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 TEKT4Q8WW24 435 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 PRCCQ92733 491 aaPredicted RBP21.69■■□□□ 1.06
HOXC13-201ENST00000243056 MMTAG2Q9BU76 263 aaKnown RBP21.69■■□□□ 1.06
HOXC13-201ENST00000243056 GPRC5DQ9NZD1 345 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 SBF1O95248 1867 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 GLI1P08151 1106 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 DRD4P21917 467 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 ZNF268Q14587 947 aaPredicted RBP21.69■■□□□ 1.06
HOXC13-201ENST00000243056 CDC37Q16543 378 aaPredicted RBP21.69■■□□□ 1.06
HOXC13-201ENST00000243056 ANKRD20A2Q5SQ80 823 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 ANKRD20A1Q5TYW2 823 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 ANGEL2Q5VTE6 544 aaKnown RBP21.69■■□□□ 1.06
HOXC13-201ENST00000243056 ANKRD20A3Q5VUR7 823 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 NUGGCQ68CJ6 796 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 C8orf74Q6P047 294 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 MAEAQ7L5Y9 396 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 MAATS1Q7Z4T9 603 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 SPATA20Q8TB22 786 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 SUDS3Q9H7L9 328 aaPredicted RBP21.69■■□□□ 1.06
HOXC13-201ENST00000243056 TCP11L1Q9NUJ3 509 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 CNOT8Q9UFF9 292 aaKnown RBP21.69■■□□□ 1.06
HOXC13-201ENST00000243056 SWAP70Q9UH65 585 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 PLAAQ9Y263 795 aa21.69■■□□□ 1.06
HOXC13-201ENST00000243056 LUC7L3O95232 432 aaKnown RBP21.68■■□□□ 1.06
HOXC13-201ENST00000243056 RPS12P25398 132 aaKnown RBP21.68■■□□□ 1.06
HOXC13-201ENST00000243056 WDR59Q6PJI9 974 aa21.68■■□□□ 1.06
HOXC13-201ENST00000243056 KRI1Q8N9T8 703 aaKnown RBP21.68■■□□□ 1.06
HOXC13-201ENST00000243056 SMCR8Q8TEV9 937 aaPredicted RBP21.68■■□□□ 1.06
HOXC13-201ENST00000243056 PURBQ96QR8 312 aaKnown RBP21.68■■□□□ 1.06
HOXC13-201ENST00000243056 UBA5Q9GZZ9 404 aa21.68■■□□□ 1.06
HOXC13-201ENST00000243056 TAF1DQ9H5J8 278 aaPredicted RBP21.68■■□□□ 1.06
HOXC13-201ENST00000243056 TAB2Q9NYJ8 693 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms