RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PUS7LQ9H0K6 701 aaKnown RBP9.04□□□□□ -0.96
CXCR4-201ENST00000241393 GREM2Q9H772 168 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 NCOA5Q9HCD5 579 aaKnown RBP9.04□□□□□ -0.96
CXCR4-201ENST00000241393 CNNM1Q9NRU3 951 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 ANO10Q9NW15 660 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 CEP131Q9UPN4 1083 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 COL22A1Q8NFW1 1626 aaPredicted RBP9.04□□□□□ -0.96
CXCR4-201ENST00000241393 A0A0G2JLW4 131 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 KLF18A0A0U1RQI7 1052 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 GOLGA8BA8MQT2 603 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 GSC2O15499 205 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 DNAJA2O60884 412 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 FGFR2P21802 821 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 ANTXR2P58335 489 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 SNW1Q13573 536 aaKnown RBP9.04□□□□□ -0.96
CXCR4-201ENST00000241393 IQCB1Q15051 598 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 HLFQ16534 295 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 CYP27C1Q4G0S4 372 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 CPLX2Q6PUV4 134 aaKnown RBP9.04□□□□□ -0.96
CXCR4-201ENST00000241393 MTA3Q9BTC8 594 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 BTG4Q9NY30 223 aa9.04□□□□□ -0.96
CXCR4-201ENST00000241393 ORC3Q9UBD5 711 aaPredicted RBP9.04□□□□□ -0.96
CXCR4-201ENST00000241393 TRMT112Q9UI30 125 aaKnown RBP9.04□□□□□ -0.96
CXCR4-201ENST00000241393 ANGEL1Q9UNK9 670 aaKnown RBP9.04□□□□□ -0.96
CXCR4-201ENST00000241393 RTL9Q8NET4 1388 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 CICQ96RK0 1608 aaPredicted RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 GOLGA6L19H0YKK7 550 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 EXOC5O00471 708 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 CPLX1O14810 134 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 NEMFO60524 1076 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 ME1P48163 572 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 PMS1P54277 932 aaKnown RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 BMS1Q14692 1282 aaKnown RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 GNPTABQ3T906 1256 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 DNTTIP2Q5QJE6 756 aaKnown RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 SLC9C2Q5TAH2 1124 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 VHLLQ6RSH7 139 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 TMEM151AQ8N4L1 468 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 FSIP1Q8NA03 581 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 LINC00301Q8NCQ3 95 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 ZNF830Q96NB3 372 aaPredicted RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 SSBP4Q9BWG4 385 aaPredicted RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 NAT10Q9H0A0 1025 aaKnown RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 SUCOQ9UBS9 1254 aaKnown RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 GTF2IRD1Q9UHL9 959 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 NAP1L2Q9ULW6 460 aaPredicted RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 MAPK8IP1Q9UQF2 711 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 ZBTB1Q9Y2K1 713 aa9.03□□□□□ -0.96
CXCR4-201ENST00000241393 TMA7Q9Y2S6 64 aaKnown RBP9.03□□□□□ -0.96
CXCR4-201ENST00000241393 NUP98P52948 1817 aa9.02□□□□□ -0.96
CXCR4-201ENST00000241393 NID2Q14112 1375 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 SH2B2O14492 632 aaPredicted RBP9.02□□□□□ -0.97
CXCR4-201ENST00000241393 SLC5A1P13866 664 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 PDE6AP16499 860 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 GPTP24298 496 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 HAND2P61296 217 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 DHX8Q14562 1220 aaKnown RBP9.02□□□□□ -0.97
CXCR4-201ENST00000241393 PARP10Q53GL7 1025 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 EEPD1Q7L9B9 569 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 CHST3Q7LGC8 479 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 SGMS1Q86VZ5 419 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 FAM178BQ8IXR5 827 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 CEP57L1Q8IYX8 460 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 SLC6A18Q96N87 628 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 DEPDC7Q96QD5 511 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 BPIFA3Q9BQP9 254 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 ASPNQ9BXN1 380 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 TRIM5Q9C035 493 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 TNKS2Q9H2K2 1166 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 GOLPH3LQ9H4A5 285 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 ZNF214Q9UL59 606 aaPredicted RBP9.02□□□□□ -0.97
CXCR4-201ENST00000241393 PCDHA7Q9UN72 937 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 WNK3Q9BYP7 1800 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 STK36Q9NRP7 1315 aa9.02□□□□□ -0.97
CXCR4-201ENST00000241393 TCRBV5S4A2TA0A5A2 114 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 SPTLC2O15270 562 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 GDF11O95390 407 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 ACRP10323 421 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 GNAT2P19087 354 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 LIFRP42702 1097 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 ZNF143P52747 638 aaPredicted RBP9.01□□□□□ -0.97
CXCR4-201ENST00000241393 EIF5P55010 431 aaKnown RBP9.01□□□□□ -0.97
CXCR4-201ENST00000241393 KIF23Q02241 960 aaPredicted RBP9.01□□□□□ -0.97
CXCR4-201ENST00000241393 STK38Q15208 465 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 GLIPR1L2Q4G1C9 344 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 UBE3DQ7Z6J8 389 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 BAHD1Q8TBE0 780 aaPredicted RBP9.01□□□□□ -0.97
CXCR4-201ENST00000241393 STRBPQ96SI9 672 aaKnown RBP9.01□□□□□ -0.97
CXCR4-201ENST00000241393 EPN3Q9H201 632 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 PIH1D3Q9NQM4 214 aaKnown RBP9.01□□□□□ -0.97
CXCR4-201ENST00000241393 TPX2Q9ULW0 747 aaKnown RBP9.01□□□□□ -0.97
CXCR4-201ENST00000241393 AHDC1Q5TGY3 1603 aaPredicted RBP9.01□□□□□ -0.97
CXCR4-201ENST00000241393 RREB1Q92766 1687 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 ZNF532Q9HCE3 1301 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 C4AP0C0L4 1744 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 C4BP0C0L5 1744 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 TIAM2Q8IVF5 1701 aa9.01□□□□□ -0.97
CXCR4-201ENST00000241393 CMA1P23946 247 aa9□□□□□ -0.97
CXCR4-201ENST00000241393 PHKA1P46020 1223 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms