RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SMAP1Q8IYB5 467 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-201ENST00000230480 TEKT3Q9BXF9 490 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 ZNF215Q9UL58 517 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-201ENST00000230480 CHMP2AO43633 222 aa15.5■□□□□ 0.07
VEGFA-201ENST00000230480 GAS7O60861 476 aa15.5■□□□□ 0.07
VEGFA-201ENST00000230480 BFSP2Q13515 415 aa15.5■□□□□ 0.07
VEGFA-201ENST00000230480 MIS18BP1Q6P0N0 1132 aa15.5■□□□□ 0.07
VEGFA-201ENST00000230480 PDXDC2PQ6P474 469 aa15.5■□□□□ 0.07
VEGFA-201ENST00000230480 NOSTRINQ8IVI9 506 aa15.5■□□□□ 0.07
VEGFA-201ENST00000230480 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
VEGFA-201ENST00000230480 FAM20AQ96MK3 541 aa15.5■□□□□ 0.07
VEGFA-201ENST00000230480 WDR64B1ANS9 1081 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 ZBTB39O15060 712 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 C22orf31O95567 290 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 PSAPP07602 524 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 KLRC1P26715 233 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 SLC26A2P50443 739 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 IGBP1P78318 339 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 ZNF174Q15697 407 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 IL17AQ16552 155 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 MTHFD1LQ6UB35 978 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 OTOP2Q7RTS6 562 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 KIAA0319LQ8IZA0 1049 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 DNAJB3Q8WWF6 145 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 SNX21Q969T3 373 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 AZI2Q9H6S1 392 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 CDHR5Q9HBB8 845 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 TUBE1Q9UJT0 475 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 PCDHB6Q9Y5E3 794 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 PCDHA2Q9Y5H9 948 aa15.49■□□□□ 0.07
VEGFA-201ENST00000230480 CHD7Q9P2D1 2997 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 BACH1O14867 736 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 HBP1O60381 514 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 FGBP02675 491 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 THPOP40225 353 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 ANO5Q75V66 913 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 MIER3Q7Z3K6 550 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 FAM184AQ8NB25 1140 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 RDM1Q8NG50 284 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 HSD17B14Q9BPX1 270 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 SH2D3AQ9BRG2 576 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 RGL1Q9NZL6 768 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 NOD1Q9Y239 953 aa15.48■□□□□ 0.07
VEGFA-201ENST00000230480 ARID2Q68CP9 1835 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 RRN3P2A6NIE6 340 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 RSPH10B2B2RC85 870 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 SLITRK3O94933 977 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 CTSHP09668 335 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 RSPH10BP0C881 870 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 ATP2B1P20020 1258 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 SFNP31947 248 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 RFC2P35250 354 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 PBX2P40425 430 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 JAK3P52333 1124 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 DRP2Q13474 957 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 TRIM29Q14134 588 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 BANK1Q8NDB2 785 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 BBXQ8WY36 941 aaPredicted RBP15.47■□□□□ 0.07
VEGFA-201ENST00000230480 RNPC3Q96LT9 517 aaKnown RBP15.47■□□□□ 0.07
VEGFA-201ENST00000230480 NIFKQ9BYG3 293 aaKnown RBP15.47■□□□□ 0.07
VEGFA-201ENST00000230480 AGO3Q9H9G7 860 aaKnown RBP15.47■□□□□ 0.07
VEGFA-201ENST00000230480 TRPC6Q9Y210 931 aa15.47■□□□□ 0.07
VEGFA-201ENST00000230480 IGKV6-21A0A0C4DH24 114 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 SMIM35A0A1B0GVV1 85 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 ARHGEF15O94989 841 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 OATP04181 439 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 SPATA31C1P0DKV0 1188 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 MCM7P33993 719 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 PRKCEQ02156 737 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 LPIN1Q14693 890 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 EPHA7Q15375 998 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 PLEKHG4Q58EX7 1191 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 ZNF484Q5JVG2 852 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 FAM160B1Q5W0V3 765 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 PSRC1Q6PGN9 363 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-201ENST00000230480 TRMT1LQ7Z2T5 733 aaKnown RBP15.46■□□□□ 0.07
VEGFA-201ENST00000230480 TMCO2Q7Z6W1 182 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-201ENST00000230480 RTN4RL1Q86UN2 441 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-201ENST00000230480 DBF4BQ8NFT6 615 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 TMEM40Q8WWA1 233 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 TTYH1Q9H313 450 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-201ENST00000230480 BRMS1Q9HCU9 246 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.46■□□□□ 0.07
VEGFA-201ENST00000230480 COL1A2P08123 1366 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 TTC3P53804 2025 aa15.46■□□□□ 0.07
VEGFA-201ENST00000230480 COL4A6Q14031 1691 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 A0A087WWV3 80 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 K7ELQ4 463 aaPredicted RBP15.45■□□□□ 0.06
VEGFA-201ENST00000230480 NEMFO60524 1076 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 CAND2O75155 1236 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 GNAT1P11488 350 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 SAFBQ15424 915 aaKnown RBP eCLIP15.45■□□□□ 0.06
VEGFA-201ENST00000230480 TTC38Q5R3I4 469 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 TAF2Q6P1X5 1199 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.45■□□□□ 0.062e-35■■■■□ 25.1
VEGFA-201ENST00000230480 Q7L0L9 218 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 RPUSD2Q8IZ73 545 aaKnown RBP15.45■□□□□ 0.06
VEGFA-201ENST00000230480 DYDC2Q96IM9 177 aa15.45■□□□□ 0.06
VEGFA-201ENST00000230480 NAP1L4Q99733 375 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms