RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PDIA5Q14554 519 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 KRT27Q7Z3Y8 459 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 CCDC43Q96MW1 224 aaKnown RBP10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 ZIM3Q96PE6 472 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 SH3GL2Q99962 352 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 PANK4Q9NVE7 773 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 GRIN2DO15399 1336 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 FKBP3Q00688 224 aaKnown RBP10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM26FQ5R3K3 315 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 NAA35Q5VZE5 725 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 DPP8Q6V1X1 898 aaPredicted RBP10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 ADGRF4Q8IZF3 695 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM133AQ8N9E0 248 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 PIK3R5Q8WYR1 880 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 RNPC3Q96LT9 517 aaKnown RBP10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 EPB41L5Q9HCM4 733 aa10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 DDX25Q9UHL0 483 aaKnown RBP10.29□□□□□ -0.76
HLA-DOA-201ENST00000229829 GOLGA6L10A6NI86 522 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 MARCH6O60337 910 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 FGFR1OPO95684 399 aaKnown RBP10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 EPHB4P54760 987 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 GUCY2DQ02846 1103 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 RAPGEF1Q13905 1077 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 SLC9C1Q4G0N8 1177 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 SFMBT2Q5VUG0 894 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 KCTD1Q719H9 257 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 MAEAQ7L5Y9 396 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 TSG101Q99816 390 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 CCNL1Q9UK58 526 aaPredicted RBP10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 KIAA1024Q9UPX6 916 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 MYH7BA7E2Y1 1941 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 SRCAPQ6ZRS2 3230 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 POTEB3A0JP26 581 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 POTECB2RU33 542 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L15C9J2P7 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L13C9JLJ4 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L11C9JVI0 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L18D6R9N7 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L22D6RA61 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L17D6RBQ6 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L19D6RCP7 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L20D6RJB6 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 ACTN1P12814 892 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 STAT3P40763 770 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 NOVP48745 357 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L24Q0WX57 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 GNPTABQ3T906 1256 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 ACCSLQ4AC99 568 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 PREPLQ4J6C6 727 aaPredicted RBP10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L6PQ6QN14 398 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 POTEBQ6S5H4 581 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 ZNF473Q8WTR7 871 aaKnown RBP10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 IQCDQ96DY2 449 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 KRT12Q99456 494 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 ZHX3Q9H4I2 956 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 RIC8AQ9NPQ8 531 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 PCDHA12Q9UN75 941 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 ABCB11O95342 1321 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 SSU72P8A0A1W2PR75 194 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 HEXIM1O94992 359 aaKnown RBP10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 SMARCA1P28370 1054 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 LSP1P33241 339 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 NT5C2P49902 561 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 RBM5P52756 815 aaKnown RBP eCLIP10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 KIAA0753Q2KHM9 967 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 TRIM68Q6AZZ1 485 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 CYB5D1Q6P9G0 228 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 SCFD1Q8WVM8 642 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 RAB34Q9BZG1 259 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 BCAS3Q9H6U6 928 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 CEP72Q9P209 647 aa10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 TPX2Q9ULW0 747 aaKnown RBP10.28□□□□□ -0.76
HLA-DOA-201ENST00000229829 FAM170AA1A519 330 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 RBAK-RBAKDNI3L0D1 243 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 LGR5O75473 907 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 RFC4P35249 363 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 IRX1P78414 480 aaPredicted RBP10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 HERC4Q5GLZ8 1057 aaPredicted RBP10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 CPLX4Q7Z7G2 160 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 CNBD1Q8NA66 436 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 CCT8L2Q96SF2 557 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 DDX4Q9NQI0 724 aaKnown RBP10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 POLLQ9UGP5 575 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 L3MBTL1Q9Y468 752 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 PCDHA2Q9Y5H9 948 aa10.27□□□□□ -0.76
HLA-DOA-201ENST00000229829 GOLGA8KD6RF30 607 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 SERPING1P05155 500 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 CASP5P51878 434 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 ZKSCAN8Q15776 578 aaPredicted RBP10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 THEMIS2Q5TEJ8 643 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 EMBQ6PCB8 327 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 SEPT12Q8IYM1 358 aa10.27□□□□□ -0.77
HLA-DOA-201ENST00000229829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms