RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
PXN-201ENST00000228307 RIC8AQ9NPQ8 531 aa17.13■□□□□ 0.33
PXN-201ENST00000228307 DDX39AO00148 427 aaKnown RBP17.13■□□□□ 0.33
PXN-201ENST00000228307 GFPT2O94808 682 aa17.13■□□□□ 0.33
PXN-201ENST00000228307 FGGP02679 453 aa17.13■□□□□ 0.33
PXN-201ENST00000228307 GJC1P36383 396 aa17.13■□□□□ 0.33
PXN-201ENST00000228307 RPAINQ86UA6 219 aa17.13■□□□□ 0.33
PXN-201ENST00000228307 CASKIN2Q8WXE0 1202 aa17.13■□□□□ 0.33
PXN-201ENST00000228307 ELAC2Q9BQ52 826 aaKnown RBP17.13■□□□□ 0.33
PXN-201ENST00000228307 LZTS2Q9BRK4 669 aa17.13■□□□□ 0.33
PXN-201ENST00000228307 GGT7Q9UJ14 662 aa17.13■□□□□ 0.33
PXN-201ENST00000228307 USP17L10C9JJH3 530 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 FAM13AO94988 1023 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 GH2P01242 217 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 HOXA13P31271 388 aaPredicted RBP17.12■□□□□ 0.33
PXN-201ENST00000228307 VPS41P49754 854 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 ZKSCAN8Q15776 578 aaPredicted RBP17.12■□□□□ 0.33
PXN-201ENST00000228307 MAEAQ7L5Y9 396 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 SP8Q8IXZ3 490 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 RAB17Q9H0T7 212 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 KBTBD4Q9NVX7 518 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 BARHL2Q9NY43 387 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.12■□□□□ 0.33
PXN-201ENST00000228307 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
PXN-201ENST00000228307 SLIT2O94813 1529 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 SPOPO43791 374 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 SORBS3O60504 671 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 FMO2Q99518 471 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 TLR10Q9BXR5 811 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 PTPN22Q9Y2R2 807 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 SLFN13Q68D06 897 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 HS2ST1Q7LGA3 356 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 CERS5Q8N5B7 392 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 MSL3Q8N5Y2 521 aaKnown RBP17.12■□□□□ 0.33
PXN-201ENST00000228307 ZNF507Q8TCN5 953 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 PACSIN1Q9BY11 444 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 CEP72Q9P209 647 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 STK17AQ9UEE5 414 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 PCDHA1Q9Y5I3 950 aa17.12■□□□□ 0.33
PXN-201ENST00000228307 MYH14Q7Z406 1995 aaKnown RBP17.12■□□□□ 0.33
PXN-201ENST00000228307 A0A087X0T9 212 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 E9PMD0 336 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 FAM228BP0C875 321 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 ACTN1P12814 892 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 PRAMEF18Q5VWM3 479 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 SYCE1Q8N0S2 351 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
PXN-201ENST00000228307 CYFIP2Q96F07 1278 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 SNX24Q9Y343 169 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 DAAM1Q9Y4D1 1078 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 ZNF211Q13398 564 aaPredicted RBP17.11■□□□□ 0.33
PXN-201ENST00000228307 PPP2R5AQ15172 486 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 TMED8Q6PL24 325 aaPredicted RBP17.11■□□□□ 0.33
PXN-201ENST00000228307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■□□ 18.4
PXN-201ENST00000228307 SLC24A3Q9HC58 644 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 GNA14O95837 355 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 PPP2R2AP63151 447 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 CETN1Q12798 172 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 KCNH2Q12809 1159 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 TRADDQ15628 312 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 MEA1Q16626 185 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 CCDC13Q8IYE1 715 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 KIRREL3Q8IZU9 778 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 MDM1Q8TC05 714 aa17.11■□□□□ 0.33
PXN-201ENST00000228307 ORC4O43929 436 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 OTUD6AQ7L8S5 288 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 HVCN1Q96D96 273 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 MLXIPLQ9NP71 852 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 DNM3Q9UQ16 869 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
PXN-201ENST00000228307 TBC1D10BQ4KMP7 808 aaPredicted RBP17.1■□□□□ 0.33
PXN-201ENST00000228307 RCSD1Q6JBY9 416 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 KAT2BQ92831 832 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 NAP1L3Q99457 506 aaPredicted RBP17.1■□□□□ 0.33
PXN-201ENST00000228307 CELF4Q9BZC1 486 aaKnown RBP17.1■□□□□ 0.33
PXN-201ENST00000228307 ACTR5Q9H9F9 607 aaPredicted RBP17.1■□□□□ 0.33
PXN-201ENST00000228307 SH3GLB2Q9NR46 395 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
PXN-201ENST00000228307 FAM107AO95990 144 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 CNKSR1Q969H4 720 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 PSTPIP2Q9H939 334 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 SLC40A1Q9NP59 571 aa17.1■□□□□ 0.33
PXN-201ENST00000228307 GEMIN8Q9NWZ8 242 aaKnown RBP17.1■□□□□ 0.33
PXN-201ENST00000228307 ZNF263O14978 683 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 TTI1O43156 1089 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 LRRN2O75325 713 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 TTLL1O95922 423 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 SLC8A1P32418 973 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 CYP2J2P51589 502 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 CUL1Q13616 776 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 KLHDC7AQ5VTJ3 777 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 SLC30A10Q6XR72 485 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 PARP9Q8IXQ6 854 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 NT5C3AQ9H0P0 336 aa17.09■□□□□ 0.33
PXN-201ENST00000228307 STMN4Q9H169 189 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms