RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 MAGEC2Q9UBF1 373 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 TRIM10Q9UDY6 481 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 FAM237AA0A1B0GTK4 181 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 CCDC151A5D8V7 595 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 ARHGEF35A5YM69 484 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 CASP14P31944 242 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 CASP8Q14790 479 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 ECM1Q16610 540 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 RAD54LQ92698 747 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 MTRQ99707 1265 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 LRRC27Q9C0I9 530 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 KCNMB3Q9NPA1 279 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 FBXO40Q9UH90 709 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 SYNRGQ9UMZ2 1314 aa12.91□□□□□ -0.34
TNFAIP1-201ENST00000226225 MYMKA6NI61 221 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 STX10O60499 249 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 MDM2Q00987 491 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 SETQ01105 290 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 PAK1Q13153 545 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 STXBP2Q15833 593 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 Q3C1V9 767 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 PANK4Q9NVE7 773 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 CYP39A1Q9NYL5 469 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 STK17AQ9UEE5 414 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 A0A0G2JLL6 359 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 CTAGE9A4FU28 777 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 FAM13AO94988 1023 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 TUBB4AP04350 444 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 GTF2A2P52657 109 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 BEND6Q5SZJ8 279 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 PRRT2Q7Z6L0 340 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 CCDC65Q8IXS2 484 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 MB21D1Q8N884 522 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 MMP19Q99542 508 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 VPS16Q9H269 839 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 HDAC6Q9UBN7 1215 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 ADD3Q9UEY8 706 aaKnown RBP12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 FAM170AA1A519 330 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 CTAGE15A4D2H0 777 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 CTAGE8P0CG41 777 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 HSD17B4P51659 736 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 SLC20A2Q08357 652 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 Q4G0T1 1027 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 CTAGE6Q86UF2 777 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 CTAGE4Q8IX94 777 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 ETNPPLQ8TBG4 499 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 UNC45AQ9H3U1 944 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 TXNRD2Q9NNW7 524 aa12.9□□□□□ -0.34
TNFAIP1-201ENST00000226225 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 PRCPP42785 496 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 LIG3P49916 1009 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CCNA1P78396 465 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 MORC3Q14149 939 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CNNM4Q6P4Q7 775 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 MPHOSPH6Q99547 160 aaKnown RBP12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 LXNQ9BS40 222 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 MLXIPQ9HAP2 919 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 TBX3O15119 743 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 ATP9AO75110 1047 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CLSTN1O94985 981 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 GJA5P36382 358 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 FILIP1LQ4L180 1135 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 MOXD1Q6UVY6 613 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 MYCT1Q8N699 235 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 JRKLQ9Y4A0 524 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 SSC5DA1L4H1 1573 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CYP3A7-CYP3A51PA0A087WV96 503 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 BTBD19C9JJ37 291 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CYP3A7P24462 503 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 STK4Q13043 487 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 SH3D19Q5HYK7 790 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CYFIP1Q7L576 1253 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 OTOP1Q7RTM1 612 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CHST13Q8NET6 341 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 LENG9Q96B70 501 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CPA4Q9UI42 421 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 CDC23Q9UJX2 597 aa12.89□□□□□ -0.35
TNFAIP1-201ENST00000226225 NOP56O00567 594 aaKnown RBP12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 CIITAP33076 1130 aa12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 BRD3Q15059 726 aa12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 XKR9Q5GH70 373 aa12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 ZNF658Q5TYW1 1059 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 GPRC5AQ8NFJ5 357 aa12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 BLOC1S4Q9NUP1 217 aa12.88□□□□□ -0.35
TNFAIP1-201ENST00000226225 KBTBD4Q9NVX7 518 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms