RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 RNPC3Q96LT9 517 aaKnown RBP14.3□□□□□ -0.12
LSM5-201ENST00000223084 TUBE1Q9UJT0 475 aa14.3□□□□□ -0.12
LSM5-201ENST00000223084 VAV3Q9UKW4 847 aa14.3□□□□□ -0.12
LSM5-201ENST00000223084 KIF3AQ9Y496 699 aa14.3□□□□□ -0.12
LSM5-201ENST00000223084 EVPLQ92817 2033 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 MBLAC1A4D2B0 266 aaPredicted RBP14.29□□□□□ -0.12
LSM5-201ENST00000223084 RRN3P2A6NIE6 340 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 TBX3O15119 743 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 ZNF862O60290 1169 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 HBP1O60381 514 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 NEMFO60524 1076 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 NBNO60934 754 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 FGBP02675 491 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 CTSHP09668 335 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 SFNP31947 248 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 MCM7P33993 719 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 SLC26A2P50443 739 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 ZNF174Q15697 407 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 CALCRLQ16602 461 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 MCTP1Q6DN14 999 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 OTOP2Q7RTS6 562 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 RPUSD2Q8IZ73 545 aaKnown RBP14.29□□□□□ -0.12
LSM5-201ENST00000223084 SLC17A8Q8NDX2 589 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 LRCH3Q96II8 777 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 FTOQ9C0B1 505 aaKnown RBP eCLIP14.29□□□□□ -0.12
LSM5-201ENST00000223084 TMEM60Q9H2L4 133 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 IGSF9BQ9UPX0 1349 aa14.29□□□□□ -0.12
LSM5-201ENST00000223084 H3BQV1 296 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
LSM5-201ENST00000223084 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
LSM5-201ENST00000223084 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.12
LSM5-201ENST00000223084 KLRC1P26715 233 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 PRKCEQ02156 737 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 NBR1Q14596 966 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 MBTPS1Q14703 1052 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 LRIT3Q3SXY7 679 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 NCAPH2Q6IBW4 605 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
LSM5-201ENST00000223084 MTHFD1LQ6UB35 978 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 SLFN12Q8IYM2 578 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 RDM1Q8NG50 284 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 DNAJB3Q8WWF6 145 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 OSBPL7Q9BZF2 842 aa14.28□□□□□ -0.12
LSM5-201ENST00000223084 FAM49AQ9H0Q0 323 aaPredicted RBP14.28□□□□□ -0.12
LSM5-201ENST00000223084 CXXC1Q9P0U4 656 aaPredicted RBP14.28□□□□□ -0.12
LSM5-201ENST00000223084 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 ZBTB42B2RXF5 422 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 OATP04181 439 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 RFC2P35250 354 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 TXKP42681 527 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 TOB1P50616 345 aaPredicted RBP14.27□□□□□ -0.13
LSM5-201ENST00000223084 SPIRE1Q08AE8 756 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 TCTN1Q2MV58 587 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 TTC38Q5R3I4 469 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 LARP1BQ659C4 914 aaKnown RBP14.27□□□□□ -0.13
LSM5-201ENST00000223084 BBXQ8WY36 941 aaPredicted RBP14.27□□□□□ -0.13
LSM5-201ENST00000223084 HERVK_113Q902F9 699 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 TNPO1Q92973 898 aaKnown RBP14.27□□□□□ -0.13
LSM5-201ENST00000223084 MTMR9Q96QG7 549 aa14.27□□□□□ -0.13
LSM5-201ENST00000223084 LAMA3Q16787 3333 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 TMEM150BA6NC51 233 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 ZBBXA8MT70 800 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 STBD1O95210 358 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 CHRNA1P02708 482 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 PFKMP08237 780 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 ZNF484Q5JVG2 852 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 FAM109BQ6ICB4 259 aaPredicted RBP14.26□□□□□ -0.13
LSM5-201ENST00000223084 TAF2Q6P1X5 1199 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 SNX21Q969T3 373 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 TTC12Q9H892 705 aaPredicted RBP14.26□□□□□ -0.13
LSM5-201ENST00000223084 NRBP2Q9NSY0 501 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 NOL7Q9UMY1 257 aaKnown RBP14.26□□□□□ -0.13
LSM5-201ENST00000223084 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 PCDHA2Q9Y5H9 948 aa14.26□□□□□ -0.13
LSM5-201ENST00000223084 COL1A2P08123 1366 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 GRXCR1A8MXD5 290 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 CAND2O75155 1236 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 C22orf31O95567 290 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 CXCL10P02778 98 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 MGAT3Q09327 533 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 TMEM62Q0P6H9 643 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 CTTNQ14247 550 aaKnown RBP14.25□□□□□ -0.13
LSM5-201ENST00000223084 EPHA7Q15375 998 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 RSPH3Q86UC2 560 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 DYDC2Q96IM9 177 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 FAM167AQ96KS9 214 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 SH2D3AQ9BRG2 576 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 RGL1Q9NZL6 768 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 WRAP73Q9P2S5 460 aaPredicted RBP14.25□□□□□ -0.13
LSM5-201ENST00000223084 SEPT9Q9UHD8 586 aaPredicted RBP14.25□□□□□ -0.13
LSM5-201ENST00000223084 PCDHA12Q9UN75 941 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 CDY2AQ9Y6F7 541 aa14.25□□□□□ -0.13
LSM5-201ENST00000223084 LAMA2P24043 3122 aaKnown RBP14.24□□□□□ -0.13
LSM5-201ENST00000223084 LOXHD1Q8IVV2 1947 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 POTEMA6NI47 508 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 DDX11L8A8MPP1 907 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms