RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.41■■□□□ 1.5
CCDC9-201ENST00000221922 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.41■■□□□ 1.5
CCDC9-201ENST00000221922 IGLV3-22A0A075B6J6 115 aa24.4■■□□□ 1.5
CCDC9-201ENST00000221922 CETN3O15182 167 aa24.4■■□□□ 1.5
CCDC9-201ENST00000221922 AKR1B10O60218 316 aa24.4■■□□□ 1.5
CCDC9-201ENST00000221922 MYBL2P10244 700 aa24.4■■□□□ 1.5
CCDC9-201ENST00000221922 PABPC4Q13310 644 aaKnown RBP eCLIP24.4■■□□□ 1.53e-7■■■■■ 37.9
CCDC9-201ENST00000221922 CCDC70Q6NSX1 233 aa24.4■■□□□ 1.5
CCDC9-201ENST00000221922 CCDC174Q6PII3 467 aa24.4■■□□□ 1.5
CCDC9-201ENST00000221922 SYN2Q92777 582 aaPredicted RBP24.4■■□□□ 1.5
CCDC9-201ENST00000221922 ZBTB9Q96C00 473 aa24.4■■□□□ 1.5
CCDC9-201ENST00000221922 FAM204AQ9H8W3 233 aa24.4■■□□□ 1.5
CCDC9-201ENST00000221922 SSU72P8A0A1W2PR75 194 aa24.39■■□□□ 1.5
CCDC9-201ENST00000221922 ZMYND10O75800 440 aa24.39■■□□□ 1.5
CCDC9-201ENST00000221922 MOCS3O95396 460 aa24.39■■□□□ 1.5
CCDC9-201ENST00000221922 IVLP07476 585 aa24.39■■□□□ 1.5
CCDC9-201ENST00000221922 RPS12P25398 132 aaKnown RBP24.39■■□□□ 1.5
CCDC9-201ENST00000221922 KCNMA1Q12791 1236 aa24.39■■□□□ 1.5
CCDC9-201ENST00000221922 SELENOOQ9BVL4 669 aa24.39■■□□□ 1.5
CCDC9-201ENST00000221922 EHMT1Q9H9B1 1298 aa24.39■■□□□ 1.5
CCDC9-201ENST00000221922 GOLGB1Q14789 3259 aaKnown RBP24.39■■□□□ 1.49
CCDC9-201ENST00000221922 ZBTB7AO95365 584 aa24.39■■□□□ 1.49
CCDC9-201ENST00000221922 CFBP00751 764 aa24.39■■□□□ 1.49
CCDC9-201ENST00000221922 TCP1P17987 556 aaKnown RBP24.39■■□□□ 1.49
CCDC9-201ENST00000221922 POLD1P28340 1107 aa24.39■■□□□ 1.49
CCDC9-201ENST00000221922 ADAM9Q13443 819 aa24.39■■□□□ 1.49
CCDC9-201ENST00000221922 ZYXQ15942 572 aaKnown RBP24.39■■□□□ 1.49
CCDC9-201ENST00000221922 AENQ8WTP8 325 aaKnown RBP24.39■■□□□ 1.49
CCDC9-201ENST00000221922 ALS2CR12Q96Q35 445 aa24.39■■□□□ 1.49
CCDC9-201ENST00000221922 GLIS2Q9BZE0 524 aaPredicted RBP24.39■■□□□ 1.49
CCDC9-201ENST00000221922 PHF20L1A8MW92 1017 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 NFKBIEO00221 500 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 PSMC6P62333 389 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 TNFAIP1Q13829 316 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 RASA3Q14644 834 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 OSBPL9Q96SU4 736 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 REEP2Q9BRK0 252 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 DEFB129Q9H1M3 183 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 TRAF3IP3Q9Y228 551 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 HYOU1Q9Y4L1 999 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 RBAK-RBAKDNI3L0D1 243 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 MEIS1O00470 390 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 EYA4O95677 639 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 MAGEA1P43355 309 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 SPATA4Q8NEY3 305 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 CYP2W1Q8TAV3 490 aa24.38■■□□□ 1.49
CCDC9-201ENST00000221922 EIF2AK1Q9BQI3 630 aaKnown RBP24.38■■□□□ 1.49
CCDC9-201ENST00000221922 SHTN1A0MZ66 631 aa24.37■■□□□ 1.49
CCDC9-201ENST00000221922 KNOP1Q1ED39 458 aaKnown RBP24.37■■□□□ 1.49
CCDC9-201ENST00000221922 HGSNATQ68CP4 663 aa24.37■■□□□ 1.49
CCDC9-201ENST00000221922 TEPSINQ96N21 525 aa24.37■■□□□ 1.49
CCDC9-201ENST00000221922 TUFT1Q9NNX1 390 aa24.37■■□□□ 1.49
CCDC9-201ENST00000221922 GINM1Q9NU53 330 aa24.37■■□□□ 1.49
CCDC9-201ENST00000221922 RABGAP1Q9Y3P9 1069 aa24.37■■□□□ 1.49
CCDC9-201ENST00000221922 CALUO43852 315 aaPredicted RBP24.36■■□□□ 1.49
CCDC9-201ENST00000221922 ERCC3P19447 782 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 EPS15P42566 896 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 PTGER2P43116 358 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 EPM2AIP1Q7L775 607 aaPredicted RBP24.36■■□□□ 1.49
CCDC9-201ENST00000221922 SFR1Q86XK3 245 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 RNF10Q8N5U6 811 aaKnown RBP24.36■■□□□ 1.49
CCDC9-201ENST00000221922 TBC1D5Q92609 795 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 LSM14BQ9BX40 385 aaKnown RBP24.36■■□□□ 1.49
CCDC9-201ENST00000221922 MTFR1LQ9H019 292 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 TBCAO75347 108 aaKnown RBP24.36■■□□□ 1.49
CCDC9-201ENST00000221922 NR2F2P24468 414 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 SLC9C1Q4G0N8 1177 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 SFMBT2Q5VUG0 894 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 FRMD5Q7Z6J6 570 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 LDHDQ86WU2 507 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 CCDC155Q8N6L0 562 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 AFAP1L1Q8TED9 768 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 CRACR2AQ9BSW2 395 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 WDR18Q9BV38 432 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 TSPYL1Q9H0U9 437 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 FBXO28Q9NVF7 368 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 SALL4Q9UJQ4 1053 aa24.36■■□□□ 1.49
CCDC9-201ENST00000221922 AGPSO00116 658 aa24.35■■□□□ 1.49
CCDC9-201ENST00000221922 PDXKO00764 312 aa24.35■■□□□ 1.49
CCDC9-201ENST00000221922 GAP43P17677 238 aa24.35■■□□□ 1.49
CCDC9-201ENST00000221922 BMT2Q1RMZ1 405 aa24.35■■□□□ 1.49
CCDC9-201ENST00000221922 GSPT2Q8IYD1 628 aaKnown RBP24.35■■□□□ 1.49
CCDC9-201ENST00000221922 GOLGA6L1Q8N7Z2 621 aa24.35■■□□□ 1.49
CCDC9-201ENST00000221922 ZNF341Q9BYN7 854 aa24.35■■□□□ 1.49
CCDC9-201ENST00000221922 BHMT2Q9H2M3 363 aa24.35■■□□□ 1.49
CCDC9-201ENST00000221922 RBBP6Q7Z6E9 1792 aaKnown RBP24.35■■□□□ 1.49
CCDC9-201ENST00000221922 NOL4O94818 638 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 SERPING1P05155 500 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 GGCXP38435 758 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 CYP4A11Q02928 519 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 NFRKBQ6P4R8 1299 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 LPAR1Q92633 364 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 SLC5A5Q92911 643 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 LRRC1Q9BTT6 524 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 LUC7LQ9NQ29 371 aaKnown RBP24.34■■□□□ 1.49
CCDC9-201ENST00000221922 LTBP3Q9NS15 1303 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 MUTP22033 750 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 CASP5P51878 434 aa24.34■■□□□ 1.49
CCDC9-201ENST00000221922 GFPT1Q06210 699 aaPredicted RBP24.34■■□□□ 1.49
CCDC9-201ENST00000221922 DRC1Q96MC2 740 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms