RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 FAM114A2Q9NRY5 505 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 NARFQ9UHQ1 456 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 PNMA2Q9UL42 364 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 C5orf60A6NFR6 353 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 PLSCR1O15162 318 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 DNAJC8O75937 253 aaPredicted RBP10.55□□□□□ -0.72
TUBB1-201ENST00000217133 MMEP08473 750 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 GHRP10912 638 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 ITGA4P13612 1032 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 DRD4P21917 467 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 ECHS1P30084 290 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 MYO1EQ12965 1108 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 PSMD2Q13200 908 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 UBE4AQ14139 1066 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 ALKBH5Q6P6C2 394 aaKnown RBP10.55□□□□□ -0.72
TUBB1-201ENST00000217133 VPS36Q86VN1 386 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 DNAAF5Q86Y56 855 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 CCT6BQ92526 530 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 RAD54LQ92698 747 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 CELF4Q9BZC1 486 aaKnown RBP10.55□□□□□ -0.72
TUBB1-201ENST00000217133 TMEM59LQ9UK28 342 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 ATP6V1G2O95670 118 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 KRT18P05783 430 aaKnown RBP10.55□□□□□ -0.72
TUBB1-201ENST00000217133 ELF3P78545 371 aaPredicted RBP10.55□□□□□ -0.72
TUBB1-201ENST00000217133 FAM133BQ5BKY9 247 aaKnown RBP10.55□□□□□ -0.72
TUBB1-201ENST00000217133 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
TUBB1-201ENST00000217133 TMC3Q7Z5M5 1100 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 DZIP1Q86YF9 867 aaKnown RBP10.55□□□□□ -0.72
TUBB1-201ENST00000217133 CUL5Q93034 780 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 SETDB2Q96T68 719 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 FMO2Q99518 471 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 ZMYND12Q9H0C1 365 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 IL17RBQ9NRM6 502 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 PANK4Q9NVE7 773 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 ZNF804BA4D1E1 1349 aa10.55□□□□□ -0.72
TUBB1-201ENST00000217133 F8VZ95 297 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 CES2O00748 559 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 FLOT1O75955 427 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 GNA14O95837 355 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 CALRP27797 417 aaKnown RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 EIF3BP55884 814 aaKnown RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 PTK2Q05397 1052 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 NFIXQ14938 502 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 PARP10Q53GL7 1025 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 SLC27A3Q5K4L6 730 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 C10orf76Q5T2E6 689 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 NBPF5PQ86XG9 351 aaPredicted RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 ZNF384Q8TF68 577 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 THOC1Q96FV9 657 aaKnown RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 PNMA5Q96PV4 448 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 LZTS2Q9BRK4 669 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 PAEPP09466 180 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 PRDX5P30044 214 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 COASYQ13057 564 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 FAM84BQ96KN1 310 aaPredicted RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 ELAC2Q9BQ52 826 aaKnown RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 MGRN1O60291 552 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 H2AFZP0C0S5 128 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 CHN1P15882 459 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 ADAM9Q13443 819 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 BYSLQ13895 437 aaKnown RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 SBK1Q52WX2 424 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 HERC4Q5GLZ8 1057 aaPredicted RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 H2AFVQ71UI9 128 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 ADAT2Q7Z6V5 191 aaKnown RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 CAMKK2Q96RR4 588 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 TRIM51Q9BSJ1 452 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 FAM129AQ9BZQ8 928 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 NSRP1Q9H0G5 558 aaKnown RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 RAB17Q9H0T7 212 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 INTS9Q9NV88 658 aaKnown RBP10.54□□□□□ -0.72
TUBB1-201ENST00000217133 TMEM260Q9NX78 707 aa10.54□□□□□ -0.72
TUBB1-201ENST00000217133 BAZ2AQ9UIF9 1905 aaKnown RBP10.53□□□□□ -0.72
TUBB1-201ENST00000217133 CETN3O15182 167 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 RGS16O15492 202 aaPredicted RBP10.53□□□□□ -0.72
TUBB1-201ENST00000217133 CAND2O75155 1236 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 GYS1P13807 737 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 SATB1Q01826 763 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 SLC35G1Q2M3R5 365 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 ERMARDQ5T6L9 678 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 TCERG1LQ5VWI1 586 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 DENND2CQ68D51 928 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 STAMBPL1Q96FJ0 436 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 CEP63Q96MT8 703 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 TMEM47Q9BQJ4 181 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 AIPL1Q9NZN9 384 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 ZNF652Q9Y2D9 606 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 FGGP02679 453 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 ACTN1P12814 892 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 IFNAR2P48551 515 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 KCNH2Q12809 1159 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 ACCSLQ4AC99 568 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 CCDC65Q8IXS2 484 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 SYCE1Q8N0S2 351 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 NSMCE1Q8WV22 266 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 DYDC1Q8WWB3 177 aa10.53□□□□□ -0.72
TUBB1-201ENST00000217133 BZW2Q9Y6E2 419 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms