RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
TRO-201ENST00000173898 RPS6KC1Q96S38 1066 aa12.97□□□□□ -0.33
TRO-201ENST00000173898 TDRD3Q9H7E2 651 aaKnown RBP12.97□□□□□ -0.33
TRO-201ENST00000173898 CNOT10Q9H9A5 744 aaKnown RBP12.97□□□□□ -0.33
TRO-201ENST00000173898 CLTCL1P53675 1640 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 PSAPP07602 524 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 ACTN1P12814 892 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 CRKP46108 304 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 EIF3BP55884 814 aaKnown RBP12.96□□□□□ -0.33
TRO-201ENST00000173898 GFPT1Q06210 699 aaPredicted RBP12.96□□□□□ -0.33
TRO-201ENST00000173898 GRM4Q14833 912 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 BBS9Q3SYG4 887 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 TBC1D9BQ66K14 1250 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 RAD54LQ92698 747 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 IFT122Q9HBG6 1241 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 SNX24Q9Y343 169 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 EXOC1LA0A1B0GW35 172 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.33
TRO-201ENST00000173898 GPC4O75487 556 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 ACSL3O95573 720 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 GARSP41250 739 aaKnown RBP12.96□□□□□ -0.33
TRO-201ENST00000173898 IRX4P78413 519 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 COASYQ13057 564 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 SEPT6Q14141 434 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 RCN2Q14257 317 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 CCDC93Q567U6 631 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 ARMC9Q7Z3E5 817 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 METTL16Q86W50 562 aaKnown RBP12.96□□□□□ -0.33
TRO-201ENST00000173898 SMYD2Q9NRG4 433 aa12.96□□□□□ -0.33
TRO-201ENST00000173898 GCLMP48507 274 aa12.96□□□□□ -0.34
TRO-201ENST00000173898 HNRNPH2P55795 449 aaKnown RBP12.96□□□□□ -0.34
TRO-201ENST00000173898 CCNA1P78396 465 aa12.96□□□□□ -0.34
TRO-201ENST00000173898 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.34
TRO-201ENST00000173898 SPOUT1Q5T280 376 aaKnown RBP12.96□□□□□ -0.34
TRO-201ENST00000173898 RSRC2Q7L4I2 434 aaKnown RBP12.96□□□□□ -0.34
TRO-201ENST00000173898 DCAF4Q8WV16 495 aa12.96□□□□□ -0.34
TRO-201ENST00000173898 FAM20AQ96MK3 541 aa12.96□□□□□ -0.34
TRO-201ENST00000173898 GBP5Q96PP8 586 aa12.96□□□□□ -0.34
TRO-201ENST00000173898 CCDC68Q9H2F9 335 aa12.96□□□□□ -0.34
TRO-201ENST00000173898 ANKRD65E5RJM6 399 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 MT-ND3P03897 115 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 ECE1P42892 770 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 E2F5Q15329 346 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 OR6B2Q6IFH4 312 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 DPF2Q92785 391 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
TRO-201ENST00000173898 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
TRO-201ENST00000173898 IQGAP3Q86VI3 1631 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 HMGB1P1B2RPK0 211 aaPredicted RBP12.95□□□□□ -0.34
TRO-201ENST00000173898 TDP2O95551 362 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 CPP00450 1065 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 ASPHQ12797 758 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 PDCLQ13371 301 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 GLE1Q53GS7 698 aaKnown RBP12.95□□□□□ -0.34
TRO-201ENST00000173898 DARS2Q6PI48 645 aaKnown RBP12.95□□□□□ -0.34
TRO-201ENST00000173898 SEPT12Q8IYM1 358 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 GUF1Q8N442 669 aaKnown RBP12.95□□□□□ -0.34
TRO-201ENST00000173898 DNAAF3Q8N9W5 541 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 CA4P22748 312 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 ABCD1P33897 745 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 FAM133BQ5BKY9 247 aaKnown RBP12.95□□□□□ -0.34
TRO-201ENST00000173898 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 XXYLT1Q8NBI6 393 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 KCTD6Q8NC69 237 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 COL15A1P39059 1388 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 MTF1Q14872 753 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 RNF207Q6ZRF8 634 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 EXOC8Q8IYI6 725 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 MASTLQ96GX5 879 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 MSTO1Q9BUK6 570 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 HDAC6Q9UBN7 1215 aa12.95□□□□□ -0.34
TRO-201ENST00000173898 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
TRO-201ENST00000173898 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 MED7O43513 233 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 EVI5O60447 810 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 ZWINTO95229 277 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 IQCB1Q15051 598 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 RBBP5Q15291 538 aaKnown RBP12.94□□□□□ -0.34
TRO-201ENST00000173898 Q3C1V9 767 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 ZNF394Q53GI3 561 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 PDIK1LQ8N165 341 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 DCLK2Q8N568 766 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 PLAAQ9Y263 795 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 ARL4AP40617 200 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 DBN1Q16643 649 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
TRO-201ENST00000173898 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 HIBCHQ6NVY1 386 aaPredicted RBP12.94□□□□□ -0.34
TRO-201ENST00000173898 RAPH1Q70E73 1250 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 THNSL1Q8IYQ7 743 aa12.94□□□□□ -0.34
TRO-201ENST00000173898 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
TRO-201ENST00000173898 NEDD1Q8NHV4 660 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms