RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 DACH2Q96NX9 599 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 NFKBIZQ9BYH8 718 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 DNAJC25Q9H1X3 360 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 PARVGQ9HBI0 331 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 MSRAQ9UJ68 235 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ATF5Q9Y2D1 282 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 TADA2AO75478 443 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ADCY8P40145 1251 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 RAD51AP2Q09MP3 1159 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 DHX32Q7L7V1 743 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 C10orf53Q8N6V4 93 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 HTATIP2Q9BUP3 242 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 DBR1Q9UK59 544 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 ZNF148Q9UQR1 794 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 C4BPBP20851 252 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ART3Q13508 389 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 EXOC3L4Q17RC7 722 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 KIF19Q2TAC6 998 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ERAP2Q6P179 960 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 UPF3AQ9H1J1 476 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 HELLSQ9NRZ9 838 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 FGFR1OP2Q9NVK5 253 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 STMN3Q9NZ72 180 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 BMP10O95393 424 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 YWHAQP27348 245 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 NDFIP2Q9NV92 336 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 CAPN11Q9UMQ6 739 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 FAM107AO95990 144 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 PEX26Q7Z412 305 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 TRIM69Q86WT6 500 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 FAM178BQ8IXR5 827 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 TTC8Q8TAM2 541 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 CSGALNACT1Q8TDX6 532 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ARMCX3Q9UH62 379 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 SH3TC1Q8TE82 1336 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 LONRF2Q1L5Z9 754 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 MICALL2Q8IY33 904 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 AHI1Q8N157 1196 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 MMGT1Q8N4V1 131 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 PLEKHA8Q96JA3 519 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 TMEM161AQ9NX61 479 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 SORBS3O60504 671 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ZNF157P51786 506 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 MRPL28Q13084 256 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 ANGPT1Q15389 498 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 IZUMO3Q5VZ72 239 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 RSPH14Q9UHP6 348 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.69□□□□□ -1.82
NEB-201ENST00000172853 POMCP01189 267 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 XRCC5P13010 732 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 SKP1P63208 163 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 RNF180Q86T96 592 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 FAM160B2Q86V87 743 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ST13P5Q8NFI4 369 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 HUS1O60921 280 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 TDP2O95551 362 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 EEF1B2P24534 225 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 ABCE1P61221 599 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 CYP4A22Q5TCH4 519 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 TWF2Q6IBS0 349 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 GTF3C2Q8WUA4 911 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 RNF181Q9P0P0 153 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ARPP21Q9UBL0 812 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 CAB39Q9Y376 341 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 LRRIQ1Q96JM4 1722 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 TNNI3P19429 210 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 NCAPHQ15003 741 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ABCB5Q2M3G0 1257 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 MARK2Q7KZI7 788 aaKnown RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 TTC39CQ8N584 583 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 BCAS4Q8TDM0 211 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 MRFAP1L1Q96HT8 127 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 TMEM51Q9NW97 253 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 MARK1Q9P0L2 795 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 LCMT1Q9UIC8 334 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 SNX5Q9Y5X3 404 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ATAD2BQ9ULI0 1458 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 ENO2P09104 434 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 CASP14P31944 242 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 STX2P32856 288 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 PMS2P54278 862 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 CENPPQ6IPU0 288 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 AOPEPQ8N6M6 819 aa3.69□□□□□ -1.82
NEB-201ENST00000172853 PACSIN2Q9UNF0 486 aaPredicted RBP3.69□□□□□ -1.82
NEB-201ENST00000172853 AKR1B15C9JRZ8 316 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 CFAP99D6REC4 459 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 KRT33AO76009 404 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SERPINB6P35237 376 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TRIM32Q13049 653 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 RCOR2Q8IZ40 523 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 RGL4Q8IZJ4 473 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MMP19Q99542 508 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PRRG4Q9BZD6 226 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 EPN3Q9H201 632 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TMEM206Q9H813 350 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 VPS18Q9P253 973 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SOS2Q07890 1332 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 CFLARO15519 480 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 IGHDP01880 384 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms