RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TCEAL9Q9UHQ7 104 aa9.09□□□□□ -0.95
VAMP3-201ENST00000054666 ODF2LQ9ULJ1 636 aa9.09□□□□□ -0.95
VAMP3-201ENST00000054666 PCDHA13Q9Y5I0 950 aa9.09□□□□□ -0.95
VAMP3-201ENST00000054666 SAR1BQ9Y6B6 198 aa9.09□□□□□ -0.95
VAMP3-201ENST00000054666 BRCA1P38398 1863 aaKnown RBP9.08□□□□□ -0.96
VAMP3-201ENST00000054666 SHTN1A0MZ66 631 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 CCDC151A5D8V7 595 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ERLIN1O75477 346 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 LCA5LO95447 670 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 SERPING1P05155 500 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ARP10275 920 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 BCRP11274 1271 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 AMPD2Q01433 879 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 MAPK8IP2Q13387 824 aaPredicted RBP9.08□□□□□ -0.96
VAMP3-201ENST00000054666 RAPGEF1Q13905 1077 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 BRD3Q15059 726 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 TCERG1LQ5VWI1 586 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 IQCEQ6IPM2 695 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 HS2ST1Q7LGA3 356 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 MIER3Q7Z3K6 550 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 MICALL2Q8IY33 904 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 CAGE1Q8TC20 777 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 PURBQ96QR8 312 aaKnown RBP9.08□□□□□ -0.96
VAMP3-201ENST00000054666 CRACR2AQ9BSW2 395 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 LACRTQ9GZZ8 138 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 MAP3K20Q9NYL2 800 aaKnown RBP9.08□□□□□ -0.96
VAMP3-201ENST00000054666 TFR2Q9UP52 801 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ASTN1O14525 1302 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 RPTORQ8N122 1335 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 DDX39AO00148 427 aaKnown RBP9.08□□□□□ -0.96
VAMP3-201ENST00000054666 NFKBIEO00221 500 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 NFIBO00712 420 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ENC1O14682 589 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ATP8B1O43520 1251 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ATP1A1P05023 1023 aaKnown RBP9.08□□□□□ -0.96
VAMP3-201ENST00000054666 TUBBP07437 444 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 FDX1P10109 184 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 MAGEA1P43355 309 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ASIC2Q16515 512 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 C1orf186Q6ZWK4 172 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 FAM178BQ8IXR5 827 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 SMAP1Q8IYB5 467 aaPredicted RBP9.08□□□□□ -0.96
VAMP3-201ENST00000054666 SAMD3Q8N6K7 520 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 RPGRIP1Q96KN7 1286 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 TEPSINQ96N21 525 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 PARD6BQ9BYG5 372 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 MTFR1LQ9H019 292 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 GBP3Q9H0R5 595 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 AS3MTQ9HBK9 375 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 SLC38A10Q9HBR0 1119 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 HOMER2Q9NSB8 354 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ZNF446Q9NWS9 450 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 SCAF8Q9UPN6 1271 aaKnown RBP9.08□□□□□ -0.96
VAMP3-201ENST00000054666 BCS1LQ9Y276 419 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 ZNF536O15090 1300 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 DOCK1Q14185 1865 aa9.08□□□□□ -0.96
VAMP3-201ENST00000054666 RCCD1A6NED2 376 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 ZBED4O75132 1171 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 VCAM1P19320 739 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 GMPSP49915 693 aaPredicted RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 MTMR2Q13614 643 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 PAPD7Q5XG87 772 aaKnown RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 PCNX4Q63HM2 1172 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 CC2D1AQ6P1N0 951 aaPredicted RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 SLC30A10Q6XR72 485 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 GOLGA5Q8TBA6 731 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 SPAG5Q96R06 1193 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 RAVER2Q9HCJ3 691 aaKnown RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 JADE2Q9NQC1 790 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 KCNH7Q9NS40 1196 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 PKD2L1Q9P0L9 805 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 PPP1R9AQ9ULJ8 1098 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 SAMM50Q9Y512 469 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 ZNF263O14978 683 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 NOL4O94818 638 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 ZRANB2O95218 330 aaKnown RBP eCLIP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 PNMA6AP0CW24 399 aaPredicted RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 ZSCAN20P17040 1043 aaPredicted RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 GUCY2CP25092 1073 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 GHRHRQ02643 423 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 KLHL30Q0D2K2 578 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 MTMR1Q13613 665 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 NFIL3Q16649 462 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 TBC1D10BQ4KMP7 808 aaPredicted RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 ODR4Q5SWX8 454 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 GBP6Q6ZN66 633 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 GPIHBP1Q8IV16 184 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 MSANTD4Q8NCY6 345 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 BANK1Q8NDB2 785 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 CLEC4DQ8WXI8 215 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 GANQ9H2C0 597 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 EPC1Q9H2F5 836 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 RPAP3Q9H6T3 665 aaPredicted RBP9.07□□□□□ -0.96
VAMP3-201ENST00000054666 PLCB1Q9NQ66 1216 aa9.07□□□□□ -0.96
VAMP3-201ENST00000054666 PICK1Q9NRD5 415 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms