RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Scyl2Q8CFE4 930 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Arfgap2Q99K28 520 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 EmcnQ9R0H2 261 aa17.1■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Eif3dO70194 548 aaKnown RBP17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Il27raO70394 623 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 D1Pas1P16381 660 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Hoxa11P31311 313 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Traf5P70191 558 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Cct5P80316 541 aaKnown RBP17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Gxylt1Q3UHH8 404 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 PnocQ64387 187 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Gja3Q64448 417 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Trim6Q8BGE7 488 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Guca2bO09051 106 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Akap2O54931 893 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Nmt1O70310 496 aaKnown RBP17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Lmnb2P21619 596 aaKnown RBP17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Hsd17b1P51656 344 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 PltpP55065 493 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Hdhd2Q3UGR5 259 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Atp13a3Q5XF89 1219 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Krt74Q6IFZ9 495 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 SugctQ7TNE1 436 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Acat1Q8QZT1 424 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Enox2Q8R0Z2 598 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Cbwd1Q8VEH6 393 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Mageb16Q9CWV4 363 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Cmtm5Q9D6G9 156 aa17.09■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ace3D0G895 737 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Barx2O08686 283 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ighmbp2P40694 993 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Sema3eP70275 775 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Rapgef1Q3UHC1 1224 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Skap2Q3UND0 358 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Skap1Q3UUV5 355 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Znf354cQ571J5 560 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Asap3Q5U464 904 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ppp2r5cQ60996 524 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Ift20Q61025 132 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Sin3bQ62141 1098 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Mcf2lQ64096 1149 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Bst2Q8R2Q8 172 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Rnf34Q99KR6 376 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Golph3Q9CRA5 298 aa17.08■□□□□ 0.33
Sdc1-205ENSMUST00000171158 Adamtsl1Q8BLI0 1745 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Scn3aA2ASI5 1947 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Gm4907B1AXB9 411 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Akr1b10G5E895 316 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Tnfrsf11aO35305 625 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Wee1P47810 646 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 YdjcQ14BV6 310 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Rgl1Q60695 768 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Churc1Q6DG52 112 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Usp38Q8BW70 1042 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 PdxkQ8K183 312 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Calml4Q91WQ9 153 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Ergic2Q9CR89 377 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Arl2bpQ9D385 163 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 LrmdaQ9D9B4 229 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Prpf4Q9DAW6 521 aaKnown RBP17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Fam205aA2APU8 1308 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Kmt2eQ3UG20 1868 aa17.08■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Sec24cG3X972 1096 aaKnown RBP17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Gucy1b3O54865 620 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Tp53P02340 387 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 CatspereP0DP43 985 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Krt42Q6IFX2 452 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 4921524L21RikQ9D5T2 438 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Extl2Q9ES89 330 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Mrvi1Q9WUX5 899 aaKnown RBP17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Fam71aB7XG49 585 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Rps6ka1P18653 724 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Surf6P70279 355 aaKnown RBP17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 D630036H23RikQ3UQD6 204 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Krt35Q497I4 455 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 KaznQ69ZS8 779 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Slc51bQ80WK2 128 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Usp27Q8CEG8 438 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 MyripQ8K3I4 856 aa17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 PpanQ91YU8 470 aaKnown RBP17.07■□□□□ 0.32
Sdc1-205ENSMUST00000171158 C87977A2A958 498 aa17.06■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Sema4dO09126 861 aa17.06■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Acsbg2Q2XU92 667 aa17.06■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Sco1Q5SUC9 284 aa17.06■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Brd2Q7JJ13 798 aaKnown RBP17.06■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Naa15Q80UM3 865 aaKnown RBP17.06■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Pak2Q8CIN4 524 aa17.06■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Mettl16Q9CQG2 553 aaKnown RBP17.06■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Klhdc7aA2APT9 773 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Polr2fP61219 127 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Fgfr4Q03142 799 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Cacna2d4Q5RJF7 1116 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Atp13a4Q5XF90 1193 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Mkrn3Q60764 544 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Zrsr2Q62377 462 aaKnown RBP17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Nemp2Q8CB65 421 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Cypt1Q8CH20 168 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Slc25a38Q91XD8 326 aa17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 Cse1lQ9ERK4 971 aaKnown RBP17.05■□□□□ 0.32
Sdc1-205ENSMUST00000171158 LdhbP16125 334 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 66.1 ms