RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Nhej1Q3KNJ2 295 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Prr7Q3V0I2 269 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Jade3Q6IE82 823 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Atxn7Q8R4I1 867 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Pde6cQ91ZQ1 861 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Zmynd10Q99ML0 440 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 NapaQ9DB05 295 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmem191cQ9JJB1 302 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Klra17Q9JMA4 273 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Dnajc7Q9QYI3 494 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Grik3B1AS29 919 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Olfr310B2RVZ1 332 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cetn3O35648 167 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tagap1P0CAX8 505 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Casp4P70343 373 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Trip13Q3UA06 432 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Sfi1Q3UZY0 1216 aaKnown RBP9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fgfr1opQ66JX5 399 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Aggf1Q7TN31 711 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ddx10Q80Y44 875 aaKnown RBP9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Vcpip1Q8CDG3 1220 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ttc8Q8VD72 515 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Eef1gQ9D8N0 437 aaKnown RBP9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Serpinc1P32261 465 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 PcQ05920 1178 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmed1Q3V009 227 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rnf207Q3V3A7 635 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmtc2Q56A06 836 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm5169Q5M8P2 212 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ksr1Q61097 873 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ccpg1Q640L3 753 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Stxbp2Q64324 593 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Usp17leQ7M764 540 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ahcyl1Q80SW1 530 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Acad11Q80XL6 779 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cep95Q8BVV7 827 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Trim68Q8K243 485 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Txndc5Q91W90 417 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Asic2Q925H0 512 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Noc2lQ9WV70 747 aaKnown RBP9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 1700003F12RikA2AKE5 210 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Klhl41A2AUC9 606 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ctnnal1O88327 731 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gad1P48318 593 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm1604bQ3TRG0 118 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Palb2Q3U0P1 1104 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Orc2Q60862 576 aaKnown RBP9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gpbp1Q6NXH3 473 aaKnown RBP9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Map10Q8BJS7 891 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Adgra1Q8C4G9 578 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Q8R1Y2 203 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Nup58Q8R332 587 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 PapolbQ9WVP6 641 aa9.55□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Slfn8B1ARD8 910 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Klhl33G3UW92 533 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm6121L7MUF1 212 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Nmt2O70311 529 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Pbx1P41778 430 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Acsbg2Q2XU92 667 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Lilrb4Q64281 335 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ube3cQ80U95 1083 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 VmacQ8BP01 174 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Trex1Q91XB0 314 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 1700020D05RikQ99PB1 294 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Jph2Q9ET78 696 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tfap4Q9JIZ5 338 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Acot3Q9QYR7 432 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 D430041D05RikF6ZGR6 1678 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Card9A2AIV8 536 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Bpifb4A2BGH0 617 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Dcdc2bF7BCK0 340 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 HunkO88866 714 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Fgl2P12804 432 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Lrrn4P59383 733 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rap1gap2Q5SVL6 712 aaKnown RBP9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rcn2Q8BP92 320 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rcor2Q8C796 523 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cplx3Q8R1B5 158 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Q922C1 641 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ppil4Q9CXG3 492 aaKnown RBP9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 B3galt4Q9Z0F0 371 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Atp8b5A3FIN4 1183 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Dync1i2O88487 612 aaKnown RBP9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Alppl2P24823 529 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gprin1Q3UNH4 932 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tigd5Q499M4 642 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rgl2Q61193 778 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Antxr2Q6DFX2 487 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Inpp5fQ8CDA1 1132 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 C8aQ8K182 587 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Lgi2Q8K4Z0 550 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 NkapQ9D0F4 415 aaKnown RBP9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tex9Q9D845 387 aa9.54□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Apol6B7ZC55 329 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm5814J3QP80 125 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cyp2d10P24456 504 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Snap25P60879 206 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Sema3eP70275 775 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Dzip1lQ499E4 774 aa9.53□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Sema4bQ62179 823 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms