RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 P04224 255 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Afap1l2Q5DTU0 825 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Rhpn1Q61085 643 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Hsph1Q61699 858 aaKnown RBP19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Gm7298A0A0N4SVU1 1476 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 DtnbO70585 659 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Znf532Q6NXK2 1036 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Tex28B1AYN9 409 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Nova2D3YVV7 556 aaKnown RBP19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Eps8Q08509 821 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 HelbQ6NVF4 1074 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Trip4Q9QXN3 581 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Faf2Q3TDN2 445 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Rundc3bQ6PDC0 408 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Epsti1Q8VDI1 314 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 Pcdha12Q91Y18 950 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 RalgapbQ8BQZ4 1484 aa19.6■□□□□ 0.73
Trim71-201ENSMUST00000111816 L3mbtl1A2A5N8 826 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Fam160a1Q505K2 1081 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Abcc5Q9R1X5 1436 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Dclre1bQ8C7W7 541 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Prl3b1P09586 222 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Serpinb2P12388 415 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Ino80dQ66JY2 873 aaKnown RBP19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Fastkd1Q6DI86 829 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Trim66Q924W6 1242 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Rad51bO35719 350 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Sesn2P58043 480 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Ica1lQ3TY65 431 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Cav1P49817 178 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Pdcd10Q8VE70 212 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Appbp2Q9DAX9 585 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Idh1O88844 414 aaKnown RBP19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Spag6Q3V0U9 509 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Tmc5Q32NZ6 967 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 BegainQ68EF6 600 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Naa35Q6PHQ8 725 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Gm28897A0A087WP44 222 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Ece1Q4PZA2 769 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Tor1aip1Q921T2 595 aaKnown RBP19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Slc24a3Q99PD7 645 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Ifi35Q9D8C4 286 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Nlrp5Q9R1M5 1163 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Orc6Q9WUJ8 262 aa19.59■□□□□ 0.73
Trim71-201ENSMUST00000111816 Plekhg4A0A1L1SU27 1217 aa19.58■□□□□ 0.73
Trim71-201ENSMUST00000111816 Ccdc69Q3TCJ8 202 aa19.58■□□□□ 0.73
Trim71-201ENSMUST00000111816 Veph1A1A535 833 aa19.58■□□□□ 0.73
Trim71-201ENSMUST00000111816 Kcna4Q61423 654 aa19.58■□□□□ 0.73
Trim71-201ENSMUST00000111816 Zfp263Q8CF60 680 aa19.58■□□□□ 0.73
Trim71-201ENSMUST00000111816 Slc8a2Q8K596 921 aa19.58■□□□□ 0.73
Trim71-201ENSMUST00000111816 Kat6bQ8BRB7 1872 aa19.58■□□□□ 0.73
Trim71-201ENSMUST00000111816 Erp44Q9D1Q6 406 aa19.58■□□□□ 0.73
Trim71-201ENSMUST00000111816 Bin2D3Z6Q9 489 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Zfp850J3QPC5 689 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Il2P04351 169 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Cdc37Q61081 379 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 CrebzfQ91ZR3 358 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Pcf11G3X9Z4 1553 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Hormad1Q9D5T7 392 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Caln1Q9JJG7 219 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Lmo7E9PYF4 1699 aaKnown RBP19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Lsp1P19973 330 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Rcn1Q05186 325 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 PaoxQ8C0L6 504 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 B3galt6Q91Z92 325 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 NkapQ9D0F4 415 aaKnown RBP19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Cyp2j7A0A140T8U1 504 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Pacsin1Q61644 441 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Nod2Q8K3Z0 1020 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Sh3kbp1Q8R550 709 aaKnown RBP19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 TbccQ8VCN9 341 aa19.58■□□□□ 0.72
Trim71-201ENSMUST00000111816 Aplp1Q03157 653 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Ccdc90bQ8C3X2 256 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Ccdc81Q9D5W4 654 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Slc4a9E9PUP3 929 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Ccdc24E9PUW8 296 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Rad51ap2G3UW63 976 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 ArpinQ9D0A3 226 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Grtp1Q9D3N8 359 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 EhhadhQ9DBM2 718 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Trim54Q9ERP3 366 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Stk36Q69ZM6 1316 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Lcn3Q62471 182 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Luzp2Q8BGY3 345 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Prkag2Q91WG5 566 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Zbed3Q9D0L1 228 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Polr3aB2RXC6 1390 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Arhgap6O54834 987 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Psma4Q9R1P0 261 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Fyb2A2A995 729 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Msr1P30204 458 aaKnown RBP19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Atp8a2P98200 1148 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Rbm17Q8JZX4 405 aaKnown RBP19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 TraipQ8VIG6 470 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Slc12a5Q91V14 1138 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Dkk3Q9QUN9 349 aa19.57■□□□□ 0.72
Trim71-201ENSMUST00000111816 Prl3d3A0A0M6L0J6 224 aa19.56■□□□□ 0.72
Trim71-201ENSMUST00000111816 Cstf3Q99LI7 717 aaKnown RBP19.56■□□□□ 0.72
Trim71-201ENSMUST00000111816 Rpa3Q9CQ71 121 aa19.56■□□□□ 0.72
Trim71-201ENSMUST00000111816 Mrpl28Q9D1B9 257 aa19.56■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms