RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Spdl1Q923A2 608 aa13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 Kremen1Q99N43 473 aa13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 Dhx30Q99PU8 1217 aaKnown RBP13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rpap3Q9D706 660 aa13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 Msgn1Q9JK54 188 aa13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rcan3Q9JKK0 239 aa13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 PolkQ9QUG2 852 aa13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 Extl3Q9WVL6 918 aa13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 Eya4Q9Z191 616 aa13.77□□□□□ -0.21
Trim50-202ENSMUST00000111180 Cyp2j7A0A140T8U1 504 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Trappc11B2RXC1 1133 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Tlk2O55047 718 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Atp9aO70228 1047 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 NcanP55066 1268 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ly9Q01965 654 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ece1Q4PZA2 769 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rbm12b2Q66JV4 834 aaKnown RBP13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rexo1Q7TT28 1213 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Moxd2Q7TT41 619 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Washc1Q8VDD8 475 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Nxf1Q99JX7 618 aaKnown RBP13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Tmem39aQ9CYC3 486 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Dnajc18Q9CZJ9 357 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Krtap5-3Q9D226 196 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Hic1Q9R1Y5 733 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Plxnb3Q9QY40 1902 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 Grin2dQ03391 1323 aa13.76□□□□□ -0.21
Trim50-202ENSMUST00000111180 MtrA6H5Y3 1253 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Gm973E9Q295 1059 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Mt-CybP00158 381 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Glud1P26443 558 aaKnown RBP13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Dpf3P58269 378 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Nol4P60954 483 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ssrp1Q08943 708 aaKnown RBP13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Nsun7Q14AW5 724 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Eif3j1Q3UGC7 261 aaKnown RBP13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Lrrc14bQ3UJB3 510 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Vwa3aQ3UVV9 1148 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Islr2Q5RKR3 745 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rsad1Q5SUV1 442 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Fscn1Q61553 493 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Adck2Q6NSR3 617 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ece2Q80Z60 881 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ano10Q8BH79 659 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 MylipQ8BM54 445 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Fam20aQ8CID3 541 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Dqx1Q924H9 718 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Vwa5aQ99KC8 793 aaKnown RBP13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Dph6Q9CQ28 267 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Haus2Q9CQS9 234 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Josd2Q9CR30 188 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Tacc2Q9JJG0 1149 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Atp1a4Q9WV27 1032 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Tle2Q9WVB2 767 aa13.75□□□□□ -0.21
Trim50-202ENSMUST00000111180 Krt36B1AQ75 473 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Rnpc3Q3UZ01 514 aaKnown RBP13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Usp13Q5BKP2 858 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Enox1Q8BHR2 643 aaKnown RBP13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Anks1bQ8BIZ1 1259 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Cnksr3Q8BMA3 555 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 NkrfQ8BY02 690 aaKnown RBP13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Psmd2Q8VDM4 908 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 GneQ91WG8 722 aaKnown RBP13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Pcdhb12Q91Y07 789 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Sppl3Q9CUS9 384 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Galk1Q9R0N0 392 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Uchl5Q9WUP7 329 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Fam205aA2APU8 1308 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Slc6a21A0A1B0GSD2 748 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Trim12cD3Z3L3 497 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 MafgO54790 162 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Arhgap6O54834 987 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Pak1O88643 545 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Psmc5P62196 406 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Acot10Q32MW3 439 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Spdye4aQ5IBH6 268 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Etaa1Q5SVT3 877 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 A1cfQ5YD48 595 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Tgoln2Q62314 363 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Fam109aQ8BH49 266 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Sun2Q8BJS4 731 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Tsen34Q8BMZ5 316 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Trim47Q8C0E3 641 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Zcchc14Q8VIG0 956 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 AacsQ9D2R0 672 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 PalmdQ9JHU2 551 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ggps1Q9WTN0 300 aa13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Mrvi1Q9WUX5 899 aaKnown RBP13.74□□□□□ -0.21
Trim50-202ENSMUST00000111180 Cul4bA2A432 970 aaKnown RBP13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Jakmip2D3YXK0 820 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Psmc6P62334 389 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ric8aQ3TIR3 530 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Mier3Q3UHF3 551 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Mcm7Q61881 719 aaKnown RBP13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Ces1eQ64176 562 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Sval3Q76I99 144 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Hook2Q7TMK6 716 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Igdcc3Q8BQC3 813 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 3830417A13RikQ8BQJ2 303 aa13.73□□□□□ -0.21
Trim50-202ENSMUST00000111180 Dennd2aQ8C4S8 1000 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms