RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Mov10P23249 1004 aaKnown RBP25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Gjb1P28230 283 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ly9Q01965 654 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Rsad1Q5SUV1 442 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Rexo1Q7TT28 1213 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 HyiQ8R1F5 277 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 PccaQ91ZA3 724 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Thap2Q9D305 217 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Rpap3Q9D706 660 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 PfkpQ9WUA3 784 aaKnown RBP25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Phka1P18826 1241 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Actr2P61161 394 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Gzf1Q4VBD9 706 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Nab2Q61127 525 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Trak2Q6P9N8 913 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 PhkbQ7TSH2 1085 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ddx19bQ8BZY3 494 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Apol10aQ8CCA5 318 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Pym1Q8CHP5 203 aaKnown RBP25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 GneQ91WG8 722 aaKnown RBP25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tas1r1Q99PG6 842 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ifi35Q9D8C4 286 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Atad5Q4QY64 1826 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Trappc11B2RXC1 1133 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 EdnrbP48302 442 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Hoxc13P50207 328 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Lpar1P61793 364 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Pstpip1P97814 415 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Olfr121Q5CZY0 321 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tsg101Q61187 391 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Nemp2Q8CB65 421 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tmem192Q9CXT7 266 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 MymkQ9D1N4 221 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tubb4aQ9D6F9 444 aa25.05■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Foxn3Q499D0 457 aa25.04■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Map1sQ8C052 973 aa25.04■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tmem63cQ8CBX0 802 aa25.04■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Pcdha7Q91Y13 937 aa25.04■■□□□ 1.6
Scn1b-201ENSMUST00000098548 CenpqQ9CPQ5 267 aa25.04■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ccdc105Q9D4K7 499 aa25.04■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ccdc121E9Q6D3 323 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 UgcgO88693 394 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Sox5P35710 763 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 PtpreP49446 699 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tbx2Q60707 711 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Samhd1Q60710 627 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ddr2Q62371 854 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Thap3Q8BJ25 218 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ccz1Q8C1Y8 480 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 1700129C05RikQ9CQ77 218 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Git2Q9JLQ2 708 aa25.03■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Magea10A2AMW4 325 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tlk2O55047 718 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Adam6bQ6IMH7 756 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tpm4Q6IRU2 248 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Smarca1Q6PGB8 1046 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Rassf10Q8BL43 508 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ccdc113Q8C5T8 377 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Rbm41Q8JZV4 413 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Smtnl1Q99LM3 459 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Znf704Q9ERQ3 566 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Copb1Q9JIF7 953 aa25.02■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ddx23D3Z0M9 819 aaKnown RBP25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Sept4P28661 478 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Pdcl3Q8BVF2 240 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Azin2Q8BVM4 459 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 MafaQ8CF90 359 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Atp2a1Q8R429 994 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Pcdhgc5Q91XW9 944 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Cep72Q9D3R3 646 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 TroapB7ZNG4 668 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Gm4307E9PZY4 289 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Zfp213E9QAW0 468 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Gm4312K9J7E2 289 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Abcb4P21440 1276 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Nsun7Q14AW5 724 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Rufy4Q3TYX8 563 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Nom1Q3UFM5 854 aaKnown RBP25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Eif3j1Q3UGC7 261 aaKnown RBP25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 P4ha1Q60715 534 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Epha7Q61772 998 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Krt14Q61781 484 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 PodnQ7TQ62 611 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Tmc3Q7TQ69 1130 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Bmp3Q8BHE5 468 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Taf6lQ8R2K4 616 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Prkag2Q91WG5 566 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Gnl2Q99LH1 728 aaKnown RBP25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 AacsQ9D2R0 672 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Eif4e3Q9DBB5 207 aa25.01■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Dnajc25A2ALW5 357 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Ly6dP35459 127 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Cyp2c29Q64458 490 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Panx2Q6IMP4 677 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Fam205cQ80YD3 371 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Tbc1d10cQ8C9V1 444 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Tgs1Q923W1 853 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Prl2c5Q9JLV9 222 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Fkbp1bQ9Z2I2 108 aa25■■□□□ 1.59
Scn1b-201ENSMUST00000098548 Kmt2eQ3UG20 1868 aa25■■□□□ 1.59
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms