RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Spocd1B1ASB6 936 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ccdc78D3Z5T1 437 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Gm44503E9PYU5 387 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Gm10436L7N1Y3 520 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Gm4758L7N258 96 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 ByslO54825 436 aaKnown RBP8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Mdh1P14152 334 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 NefhP19246 1090 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Trim43cP86449 446 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Gprin1Q3UNH4 932 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Vwa3aQ3UVV9 1148 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ccdc84Q4VA36 332 aaKnown RBP8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Adgre1Q61549 931 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Tfe3Q64092 572 aaKnown RBP8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 TxlnaQ6PAM1 554 aaKnown RBP8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Dync1li2Q6PDL0 492 aaKnown RBP8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Naa35Q6PHQ8 725 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Slc20a2Q80UP8 656 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Tbc1d22bQ80VE5 505 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Dnph1Q80VJ3 173 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Znf618Q80YY7 953 aaKnown RBP8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Dclk3Q8BWQ5 790 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Serpinb13Q8CDC0 389 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Bicdl2Q8CHW5 507 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Phldb2Q8K1N2 1249 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ssr1Q9CY50 286 aaKnown RBP8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 MicalclQ9D5U9 680 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Myl7Q9QVP4 175 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 JcadQ5DTX6 1320 aa8.31□□□□□ -1.08
Trim40-201ENSMUST00000087158 Tox2A2A472 547 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Lrrc38A2VDH3 298 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ttll10A4Q9F3 704 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Pdzrn4E9PUZ9 1014 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Pik3r1P26450 724 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Mcm5P49718 733 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Psen1P49769 467 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Traf5P70191 558 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 GscQ02591 256 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Scarf1Q5ND28 820 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 CtcfQ61164 736 aaKnown RBP8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Trim25Q61510 634 aaKnown RBP8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Gpd2Q64521 727 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 PicalmQ7M6Y3 660 aaKnown RBP8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Traf3ip3Q8C0G2 513 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Bbs7Q8K2G4 715 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Desi2Q9D291 194 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Rbp7Q9EPC5 134 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 DexiQ9WUQ7 95 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Extl3Q9WVL6 918 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Pgap3A2A559 320 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Cnbd1B1AWM0 430 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ace3D0G895 737 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 SfnO70456 248 aaKnown RBP8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 MyocO70624 490 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Prkg1P0C605 671 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Gna14P30677 355 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Epb41l4aP52963 686 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Lmntd2Q0VET5 664 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Arl14Q3SXC5 192 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Mier3Q3UHF3 551 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Cacna2d4Q5RJF7 1116 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Mrps31Q61733 384 aaKnown RBP8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Krt9Q6RHW0 743 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Supt20hQ7TT00 530 aaKnown RBP8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ankrd24Q80VM7 985 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Atg4cQ811C2 458 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Slc9b1Q8C0X2 565 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Spice1Q8C804 860 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 GanQ8CA72 597 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Stap2Q8R0L1 411 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Sgms1Q8VCQ6 419 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Slc12a8Q8VI23 705 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Grin3bQ91ZU9 1003 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Fsip1Q9D3V5 435 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Lonp2Q9DBN5 852 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 FignQ9ERZ6 759 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Cntn6Q9JMB8 1028 aa8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Add1Q9QYC0 735 aaKnown RBP8.3□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ttc38A3KMP2 465 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Gm4907B1AXB9 411 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Scgb2b19J3QM75 112 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Cetn3O35648 167 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Idh1O88844 414 aaKnown RBP8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 RaraP11416 462 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Lig1P37913 916 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Fgfr4Q03142 799 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Neurl1bQ0MW30 546 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Atp8b1Q148W0 1251 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 SlmapQ3URD3 845 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Gm5169Q5M8P2 212 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Fam183bQ5NC57 135 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Tubb2aQ7TMM9 445 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Tmco3Q8BH01 678 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Btnl9Q8BJE2 536 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Sun2Q8BJS4 731 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ttc26Q8BS45 554 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Rtp1Q8C8C1 263 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Ppfibp1Q8C8U0 969 aaKnown RBP8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Spata4Q8K3V1 295 aa8.29□□□□□ -1.08
Trim40-201ENSMUST00000087158 Usp26Q99MX1 835 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms