RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 Ddx20Q9JJY4 825 aaKnown RBP20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Oip5A2AQ14 241 aa20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Nfxl1E9Q8I7 918 aaKnown RBP20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Mdh1P14152 334 aa20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Actn4P57780 912 aaKnown RBP20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 NeblQ0II04 452 aa20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 NntQ61941 1086 aaKnown RBP20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Gpr180Q8BPS4 441 aa20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Zswim4Q8C7B8 1101 aa20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Spdl1Q923A2 608 aa20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Galnt15Q9D2N8 638 aa20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Zranb2Q9R020 330 aaKnown RBP20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Atp1a4Q9WV27 1032 aa20.18■□□□□ 0.82
Trim58-201ENSMUST00000075084 Ripor3A1L3T7 938 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Ppp1r9aH3BJD6 1292 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Has3O08650 554 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Mmp20P57748 482 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Fgfr4Q03142 799 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Papd7Q6PB75 542 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Fam20aQ8CID3 541 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Slfn14V9GXG1 899 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Sbf2E9PXF8 1872 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Eif3dO70194 548 aaKnown RBP20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Snx12O70493 165 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 P4hbP09103 509 aaKnown RBP20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Cd68P31996 326 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Rpl13P47963 211 aaKnown RBP20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Senp1P59110 640 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Ogfod1Q3U0K8 545 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Vwa3aQ3UVV9 1148 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Irak1Q62406 710 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Antxr2Q6DFX2 487 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Atp1a2Q6PIE5 1020 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Pcdhgc5Q91XW9 944 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Srgap2Q91Z67 1071 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 EpgnQ924X1 152 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Sar1bQ9CQC9 198 aa20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Nol7Q9D7Z3 254 aaKnown RBP20.17■□□□□ 0.82
Trim58-201ENSMUST00000075084 Pappa2E9PZ87 1789 aa20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 A0A286YCQ6 122 aa20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 Ap1b1O35643 943 aaKnown RBP20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 Hoxc13P50207 328 aa20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 Cdr2P97817 455 aa20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 Dcaf17Q3TUL7 519 aa20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 Actn1Q7TPR4 892 aaKnown RBP20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 Bri3bpQ8BXV2 253 aa20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 CbsQ91WT9 561 aa20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 Ubxn2aQ99KJ0 258 aa20.16■□□□□ 0.82
Trim58-201ENSMUST00000075084 Skint3A7TZF0 458 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Dhx15O35286 795 aaKnown RBP20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 MyocO70624 490 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 L1camP11627 1260 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Pafah1b1P63005 410 aaKnown RBP20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 LbrQ3U9G9 626 aaKnown RBP20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Mier3Q3UHF3 551 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 4933427I04RikQ3V053 235 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Znf354cQ571J5 560 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Ccpg1Q640L3 753 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Nipa1Q8BHK1 323 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Fam53cQ8BXQ8 393 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Mzb1Q9D8I1 188 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Smchd1Q6P5D8 2007 aaKnown RBP20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Cpb1B2RS76 415 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Rps6P62754 249 aaKnown RBP20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Map4k1P70218 827 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Lmntd2Q0VET5 664 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Fdxacb1Q3UY23 622 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 P4ha1Q60715 534 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Hdac10Q6P3E7 666 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Vcpip1Q8CDG3 1220 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Trp53inp1Q9QXE4 239 aa20.15■□□□□ 0.82
Trim58-201ENSMUST00000075084 Klhdc7aA2APT9 773 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Got1P05201 413 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Stat4P42228 749 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Raver2Q7TPD6 673 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Wdr3Q8BHB4 942 aaKnown RBP20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Sun2Q8BJS4 731 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Fzd9Q9R216 592 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Mmp15O54732 657 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Cep126Q0VBV7 1103 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Znf652Q5DU09 608 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Krt31Q61765 416 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Garem2Q6PAJ3 880 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Map3k11Q80XI6 850 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Btnl9Q8BJE2 536 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 SucoQ8C341 1250 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Slc14a1Q8VHL0 384 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Card14Q99KF0 999 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Aldh1b1Q9CZS1 519 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Lonp2Q9DBN5 852 aa20.14■□□□□ 0.81
Trim58-201ENSMUST00000075084 Etv6P97360 485 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 Dpcr1Q3TNW5 500 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 Kiaa1211Q5PR69 1207 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 Gas8Q60779 478 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 Sycp1Q62209 993 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 Sh3gl1Q62419 368 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 Krt9Q6RHW0 743 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 Ttc7aQ8BGB2 858 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 Stard7Q8R1R3 373 aa20.13■□□□□ 0.81
Trim58-201ENSMUST00000075084 AdarQ99MU3 1178 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms