RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ccdc124Q9D8X2 217 aaKnown RBP10.58□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Frmpd4A2AFR3 1320 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Tmprss11aQ3UQ41 389 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 BcrQ6PAJ1 1270 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Atp2b4Q6Q477 1205 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Kctd6Q8BNL5 237 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Calcoco1Q8CGU1 691 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cmtr1Q9DBC3 837 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Snx1Q9WV80 522 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Znf638Q61464 1960 aaKnown RBP10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Myh4Q5SX39 1939 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Aco1P28271 889 aaKnown RBP10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Xxylt1Q3U4G3 392 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ddx31Q6NZQ2 687 aaKnown RBP10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Nap1l4Q78ZA7 375 aaKnown RBP10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Vat1lQ80TB8 417 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Hook3Q8BUK6 718 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 CgasQ8C6L5 507 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 H6pdQ8CFX1 789 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Alg1Q921Q3 482 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Tom1l1Q923U0 474 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Actn2Q9JI91 894 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Capn15Q9JLG8 1095 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 BcamQ9R069 622 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Prkab1Q9R078 270 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Btbd18A0A0A6YY25 723 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Zfp984A2A7A2 547 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Map7d1A2AJI0 846 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm4758L7N258 96 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Slc27a3O88561 667 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mucl2P02815 138 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mgat1P27808 447 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Psmc6P62334 389 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Nsun7Q14AW5 724 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Slc30a9Q5IRJ6 567 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 P4ha1Q60715 534 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Foxd1Q61345 456 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 CrkQ64010 304 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Slc7a6osQ7TPE5 306 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 GanQ8CA72 597 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Rsad2Q8CBB9 362 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 CbsQ91WT9 561 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 4931423N10RikQ9D4J9 382 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 GgcxQ9QYC7 757 aa10.57□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gimap9G3X987 291 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cd44P15379 778 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Lig1P37913 916 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Elf1Q60775 612 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Krt12Q64291 487 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Slc20a2Q80UP8 656 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Thap3Q8BJ25 218 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Vmn1r218Q8R261 298 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Tor1aip1Q921T2 595 aaKnown RBP10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Snx10Q9CWT3 201 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ccdc91Q9D8L5 442 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cdc42ep4Q9JM96 349 aaKnown RBP10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Jag1Q9QXX0 1218 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Sstr3P30935 428 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mettl14Q3UIK4 456 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mtus1Q5HZI1 1210 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Krt77Q6IFZ6 572 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Stk38lQ7TSE6 464 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm5622Q810Q0 167 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Cbwd1Q8VEH6 393 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gimap4Q99JY3 219 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ttc5Q99LG4 440 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Zmynd10Q99ML0 440 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Slc12a7Q9WVL3 1083 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Eif2ak1Q9Z2R9 619 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm45194A0A140LJG2 572 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm14525B1AZA0 212 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm2012B1B0R1 212 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Krt8P11679 490 aaKnown RBP10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Aimp1P31230 310 aaKnown RBP10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Lilrb3P97484 841 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Eepd1Q3TGW2 569 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 ItgaeQ60677 1167 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Gm14819Q62478 212 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Tspyl5Q69ZB3 406 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mettl25Q6NXH8 597 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Adat2Q6P6J0 191 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Tmem132dQ76HP3 1097 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Brd2Q7JJ13 798 aaKnown RBP10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ears2Q9CXJ1 523 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Olr1Q9EQ09 363 aa10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 NesQ6P5H2 1864 aaKnown RBP10.56□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ifi207E9Q3L4 978 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Mcl1P97287 331 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Vmn1r209Q5NC97 312 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Phf8Q80TJ7 1023 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 WhrnQ80VW5 918 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Slc9b1Q8C0X2 565 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 4921524L21RikQ9D5T2 438 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Drap1Q9D6N5 205 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Rfpl4bJ3QPR6 266 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Rasip1Q3U0S6 961 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Ttf2Q5NC05 1138 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Akap4Q60662 849 aa10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 Trmt2aQ8BNV1 574 aaKnown RBP10.55□□□□□ -0.72
Pcdh1-201ENSMUST00000057185 AopepQ8BXQ6 817 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms