RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 CgasQ8C6L5 507 aa7.84□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Depdc1aQ8CIG0 804 aa7.84□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Lrrc41Q8K1C9 807 aa7.84□□□□□ -1.15
Clrn1-202ENSMUST00000055636 HyiQ8R1F5 277 aa7.84□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Kremen1Q99N43 473 aa7.84□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cmtr1Q9DBC3 837 aa7.84□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ndst4Q9EQW8 872 aa7.84□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cacna2d1O08532 1103 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Lig1P37913 916 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ddr1Q03146 911 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Tom1l2Q5SRX1 507 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Atp13a3Q5XF89 1219 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ift20Q61025 132 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Tcp10aQ80W76 438 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Lrrc4cQ8C031 640 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Bcas3Q8CCN5 928 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Defb15Q8R2I5 79 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ears2Q9CXJ1 523 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Dydc1Q9D9T0 175 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Tlr9Q9EQU3 1032 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Spocd1B1ASB6 936 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Gm1758F6VZZ1 202 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Zc3h7bF8VPP8 982 aaKnown RBP7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Vmn2r71L7N2D8 855 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Exoc4O35382 975 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ssrp1Q08943 708 aaKnown RBP7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Eepd1Q3TGW2 569 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Cyfip2Q5SQX6 1253 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Pacsin1Q61644 441 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Git1Q68FF6 770 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ankrd24Q80VM7 985 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 AarsQ8BGQ7 968 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Tor1aip2Q8BYU6 502 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Dennd2aQ8C4S8 1000 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Pak2Q8CIN4 524 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Dcaf8Q8N7N5 591 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Bst2Q8R2Q8 172 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Gps2Q921N8 327 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Abcf2Q99LE6 628 aaKnown RBP7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Golph3Q9CRA5 298 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Alpk1Q9CXB8 1231 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Rexo2Q9D8S4 237 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 FignQ9ERZ6 759 aa7.83□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Nova2D3YVV7 556 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Gm38392E9Q2A2 434 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Pip4k2aO70172 405 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Opa1P58281 960 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Clul1Q3ZRW6 464 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Fkbp3Q62446 224 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ncapg2Q6DFV1 1138 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Tlr13Q6R5N8 991 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Ythdf3Q8BYK6 585 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Lsm14bQ8CGC4 385 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 P3h4Q8K2B0 443 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Acat1Q8QZT1 424 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Dppa3Q8QZY3 150 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Josd2Q9CR30 188 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 CactinQ9CS00 772 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Rhobtb3Q9CTN4 611 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 GrapQ9CX99 217 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Efhd1Q9D4J1 240 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Cep83Q9D5R3 692 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Cmtm5Q9D6G9 156 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Frmpd4A2AFR3 1320 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Myh10Q61879 1976 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Fam205a1D3YZF6 1314 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Glt1d1A4FUP9 346 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 DgkiD3YWQ0 1071 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Usp17ldG5E8G2 545 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Usp17lcG5E8I7 545 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Magea6O89010 325 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 XlrP05531 208 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 P4hbP09103 509 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Hoxa11P31311 313 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Nlrx1Q3TL44 975 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Kctd16Q5DTY9 427 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Grik5Q61626 979 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Swap70Q6A028 585 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Magea3Q6T340 320 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Usp17leQ7M764 540 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 LdhdQ7TNG8 484 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Galnt17Q7TT15 598 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Cplx4Q80WM3 160 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Efcab14Q8BGQ6 484 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 FtoQ8BGW1 502 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Klhl7Q8BUL5 586 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Aldh5a1Q8BWF0 523 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Camkk2Q8C078 588 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Dnm1lQ8K1M6 742 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Slf1Q8R3P9 1054 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Synpo2Q91YE8 1087 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Arl2bpQ9D385 163 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Eef1gQ9D8N0 437 aaKnown RBP7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Smco2Q9DA21 347 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Sh2b2Q9JID9 621 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 SynrgQ5SV85 1306 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Wdr72D3YYM4 1114 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Fam129cD3YZB0 591 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Tph1P17532 447 aa7.82□□□□□ -1.16
Clrn1-202ENSMUST00000055636 Eps15P42567 897 aa7.82□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms