RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 NostrinQ6WKZ7 506 aa20.62■□□□□ 0.89
Vti1b-201ENSMUST00000055262 DekQ7TNV0 380 aaKnown RBP20.62■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Ccdc113Q8C5T8 377 aa20.62■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Robo3Q9Z2I4 1366 aa20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 SsbP32067 415 aaKnown RBP20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Ptpn11P35235 597 aa20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 FpgsP48760 587 aa20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Irf3P70671 419 aa20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Srd5a1Q68FF9 255 aa20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Zbtb5Q7TQG0 670 aa20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Pnma1Q8C1C8 353 aa20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Tle2Q9WVB2 767 aa20.61■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Fam205aA2APU8 1308 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Skor2A7M7C7 1008 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Acad12D3Z7X0 555 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Zfp213E9QAW0 468 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Cyp27b1O35084 507 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Per1O35973 1291 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Gas2l3Q3UWW6 683 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Mcf2lQ64096 1149 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Gja6Q6S5G4 283 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 1700001K19RikQ80ZT1 219 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Fam109aQ8BH49 266 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Thap3Q8BJ25 218 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Fbxo44Q8BK26 255 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 N4bp3Q8C7U1 537 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Fermt2Q8CIB5 680 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Hnrnpul1Q8VDM6 859 aaKnown RBP20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Q91WD4 421 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Josd2Q9CR30 188 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Krtap5-3Q9D226 196 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Dusp6Q9DBB1 381 aa20.6■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Ank3G5E8K5 1961 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Supt3B0QZW4 406 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 PrkceP16054 737 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Acvr2bP27040 536 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 RenbpP82343 430 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Mier3Q3UHF3 551 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Plcb4Q91UZ1 1175 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 YwhabQ9CQV8 246 aaKnown RBP20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Pold3Q9EQ28 462 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Fmnl1Q9JL26 1094 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Syngap1F6SEU4 1340 aa20.59■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Otud7bB2RUR8 840 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 ImpactO55091 318 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Kcnma1Q08460 1209 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Dusp4Q8BFV3 398 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 EtnpplQ8BWU8 499 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Fam20aQ8CID3 541 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Rpn1Q91YQ5 608 aaKnown RBP20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 PccaQ91ZA3 724 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Dqx1Q924H9 718 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Sppl3Q9CUS9 384 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Tmem39aQ9CYC3 486 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Fbxo16Q9QZM9 334 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 Eya4Q9Z191 616 aa20.58■□□□□ 0.89
Vti1b-201ENSMUST00000055262 SrcapA0A087WQ44 3271 aa20.58■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Zscan29E9Q5B4 869 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Bcat1P24288 386 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Spink5Q148R4 1017 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Trpc6Q61143 930 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Hook2Q7TMK6 716 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Sestd1Q80UK0 696 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Zscan22Q8BGS5 496 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Znf445Q8R2V3 986 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Sucla2Q9Z2I9 463 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Myh11O08638 1972 aa20.57■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Krt36B1AQ75 473 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Tpm3-rs7D3Z2H9 248 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Kpna6O35345 536 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Arhgap6O54834 987 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Col6a1Q04857 1025 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Rufy4Q3TYX8 563 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Srebf2Q3U1N2 1130 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Icam5Q60625 917 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Ipo5Q8BKC5 1097 aaKnown RBP20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Grik4Q8BMF5 956 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Atp8b5A3FIN4 1183 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Camsap3Q80VC9 1252 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Eif4bQ8BGD9 611 aaKnown RBP20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Clic6Q8BHB9 596 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Ppme1Q8BVQ5 386 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 NptxrQ99J85 493 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Ppp1r3gQ9CW07 347 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Rgs19Q9CX84 216 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Tmod3Q9JHJ0 352 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Mtmr1Q9Z2C4 669 aa20.56■□□□□ 0.88
Vti1b-201ENSMUST00000055262 LctF8VPT3 1931 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Sycp2lA0A0M3U1B0 842 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Art2aP17981 287 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Mcm6P97311 821 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Rnpc3Q3UZ01 514 aaKnown RBP20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Plppr4Q7TME0 766 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Cep120Q7TSG1 988 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Dennd2aQ8C4S8 1000 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Mrgprx1Q8CIP3 322 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Ppp2r2dQ925E7 453 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Kremen1Q99N43 473 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 GsdmeQ9Z2D3 512 aa20.55■□□□□ 0.88
Vti1b-201ENSMUST00000055262 Kif26aQ52KG5 1881 aa20.54■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms