RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Cul4aQ3TCH7 759 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Vwa3aQ3UVV9 1148 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Lrig3Q6P1C6 1117 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Vipas39Q8BGQ1 491 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Slc12a8Q8VI23 705 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Atp5c1Q91VR2 298 aaKnown RBP10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tdrd3Q91W18 743 aaKnown RBP10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Fam71aB7XG49 585 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Taf4bG5E8Z2 855 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 MyocO70624 490 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cct6aP80317 531 aaKnown RBP10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Lrrc36Q3V0M2 755 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 PrimpolQ6P1E7 537 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Trim47Q8C0E3 641 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 IntS13Q8QZV7 732 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Arid2E9Q7E2 1828 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cyth3O08967 399 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cetn3O35648 167 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Muc3aQ3U5A2 218 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cyp2c67Q569X9 491 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Gm11437Q5QR91 290 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Q6PD19 689 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Pank4Q80YV4 820 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Bri3bpQ8BXV2 253 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tomm22Q9CPQ3 142 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Serpinb3bQ9D1Q5 387 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Usp14Q9JMA1 493 aaKnown RBP10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Trp53inp1Q9QXE4 239 aa10.03□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Gjb6P70689 261 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Krt9Q6RHW0 743 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ctdp1Q7TSG2 960 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tmco3Q8BH01 678 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 CnstQ8CBC4 711 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Prpf6Q91YR7 941 aaKnown RBP10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Pstpip2Q99M15 334 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Kcnh7Q9ER47 1195 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 IvdQ9JHI5 424 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Hebp1Q9R257 190 aa10.02□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Atad5Q4QY64 1826 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Gcnt4E9Q649 455 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Klra9Q2TJJ8 266 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Zc3h15Q3TIV5 426 aaKnown RBP10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Thrap3Q569Z6 951 aaKnown RBP10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Tgoln2Q62314 363 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Ppp2r5aQ6PD03 486 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Usp17leQ7M764 540 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Stard7Q8R1R3 373 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Srgap2Q91Z67 1071 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Arhgef7Q9ES28 862 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Angptl3Q9R182 455 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Nup210lQ9D2F7 1881 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Btbd18A0A0A6YY25 723 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Pde4aO89084 844 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Gtf2bP62915 316 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Trim43aQ3TL54 445 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Senp7Q8BUH8 1037 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Appl2Q8K3G9 662 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 1700020D05RikQ99PB1 294 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 PdhbQ9D051 359 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Taf1dQ9D4V4 322 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Nxnl2Q9D531 156 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Spata17Q9D552 379 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Spock2Q9ER58 423 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Myl7Q9QVP4 175 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Extl3Q9WVL6 918 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Fem1bQ9Z2G0 627 aa10.02□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Kcnu1O54982 1121 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Cd44P15379 778 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 SnrpfP62307 86 aaKnown RBP10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Znf367Q0VDT2 340 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Hdac10Q6P3E7 666 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Map3k11Q80XI6 850 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Leng8Q8CBY3 785 aaKnown RBP10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Krt222Q8CCX5 294 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Tldc1Q8K0P3 455 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 PdxkQ8K183 312 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Bzw2Q91VK1 419 aaKnown RBP10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Nck2O55033 380 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Nmt1O70310 496 aaKnown RBP10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Tarbp2P97473 365 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Cep112Q5PR68 954 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 FntaQ61239 377 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Krt31Q61765 416 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Sin3bQ62141 1098 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Senp6Q6P7W0 1132 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Zfp341Q6PGC9 846 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Actn1Q7TPR4 892 aaKnown RBP10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Pgrmc2Q80UU9 217 aaKnown RBP10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Bpifb6Q8BU51 449 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Ccdc113Q8C5T8 377 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Klhl36Q8R124 613 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 RptorQ8K4Q0 1335 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Mia3Q8BI84 1930 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 TyrobpO54885 114 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Dpcr1Q3TNW5 500 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Lrig2Q52KR2 1054 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Mcf2lQ64096 1149 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Wdr3Q8BHB4 942 aaKnown RBP10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Shtn1Q8K2Q9 631 aa10.01□□□□□ -0.81
Ctnna1-201ENSMUST00000042345 Pcdhb12Q91Y07 789 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms