RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 PycardQ9EPB4 193 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tfr2Q9JKX3 798 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gfpt2Q9Z2Z9 682 aa9.22□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Axin2O88566 840 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fermt1P59113 677 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tfcp2l1Q3UNW5 479 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tmem232Q5K6N0 675 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 MtrrQ8C1A3 696 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 OplahQ8K010 1288 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 CbsQ91WT9 561 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Dnajb6O54946 365 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 IkbkbO88351 757 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Krt13P08730 437 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sh3bp1P55194 680 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Psmc5P62196 406 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Spdye4aQ5IBH6 268 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Serpinb13Q8CDC0 389 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mmgt1Q8K273 131 aaKnown RBP9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Havcr2Q8VIM0 281 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Srgap2Q91Z67 1071 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Spata17Q9D552 379 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tmod4Q9JLH8 345 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cul1Q9WTX6 776 aa9.21□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Arhgef10lA2AWP8 1280 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Taf4bG5E8Z2 855 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gm10436L7N1Y3 520 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Rps12P63323 132 aaKnown RBP9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Thrap3Q569Z6 951 aaKnown RBP9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 DeptorQ570Y9 409 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tcf12Q61286 706 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Iffo1Q8BXL9 562 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Setdb2Q8C267 713 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 ClasrpQ8CFC7 668 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Adgrf5G5E8Q8 1348 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 DesP31001 469 aaKnown RBP9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Akr1b1P45376 316 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 4933427I04RikQ3V053 235 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 E2f8Q58FA4 860 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Raver2Q7TPD6 673 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 PdxkQ8K183 312 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tor1aip1Q921T2 595 aaKnown RBP9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Sipa1l3G3X9J0 1776 aa9.21□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 ErmardE9Q048 622 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Xrcc5P27641 732 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Pla2g4aP47713 748 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Lmntd2Q0VET5 664 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Sestd1Q80UK0 696 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Thap3Q8BJ25 218 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 AagabQ8R2R3 316 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Nr3c2Q8VII8 978 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Spdl1Q923A2 608 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Noc2lQ9WV70 747 aaKnown RBP9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Greb1lB9EJV3 1913 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Hnrnph3D3Z3N4 346 aaKnown RBP9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zfpm1O35615 995 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 D1Pas1P16381 660 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Kmt5aQ2YDW7 349 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 ItgadQ3V0T4 1168 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Atp13a3Q5XF89 1219 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Psen2Q61144 448 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tm4sf1Q64302 202 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 B4galnt4Q766D5 1034 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 GanQ8CA72 597 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Arl2bpQ9D385 163 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tmx2Q9D710 295 aaKnown RBP9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zfp984A2A7A2 547 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Trim55G3X8Y1 545 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 CaluO35887 315 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Adcy7P51829 1099 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Carmil2Q3V3V9 1296 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tsga10Q6NY15 697 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 C130026I21RikQ8C898 291 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Smc6Q924W5 1097 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Fam114a1Q9D281 569 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 SyncQ9EPM5 470 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 MesdQ9ERE7 224 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Pdzd4Q9QY39 772 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ankrd31A0A140LI88 1765 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tldc2A2ACG1 198 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Ccdc170D3YXL0 722 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Gimap9G3X987 291 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Slc3a2P10852 526 aaKnown RBP9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Vsnl1P62761 191 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 SbdsP70122 250 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Phactr1Q2M3X8 580 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Rnf40Q3U319 1001 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tax1bp1Q3UKC1 814 aaKnown RBP9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Mapk4Q6P5G0 583 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Lman1lQ8VCD3 505 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Tgm5Q9D7I9 724 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Lypla2Q9WTL7 231 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Cacna1sQ02789 1880 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Barx2O08686 283 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Krt74Q6IFZ9 495 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Dnph1Q80VJ3 173 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Igdcc3Q8BQC3 813 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Atp6v0a4Q920R6 833 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Casz1Q9CWL2 1761 aa9.2□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Zfp408H7BX78 710 aa9.19□□□□□ -0.94
Sf3b1-201ENSMUST00000027127 Pth1rP41593 591 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms