RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Ndufb5Q9CQH3 189 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 GdaQ9R111 454 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 ByslO54825 436 aaKnown RBP12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 GalcP54818 684 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Garnl3Q3V0G7 1038 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Kcns3Q8BQZ8 491 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ccdc150Q8CDI7 1110 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Bap1Q99PU7 728 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Maml3D4QGC2 1135 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 GnazO70443 355 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Krt8P11679 490 aaKnown RBP12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Kcna3P16390 528 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Art2aP17981 287 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ttll4Q80UG8 1193 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cyp26b1Q811W2 512 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Q8C5C9 218 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Vcpip1Q8CDG3 1220 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Klhl35Q9CZ49 574 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cfap57Q9D180 1249 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cfap45Q9D9U9 551 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Dmap1Q9JI44 468 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Myh3P13541 1940 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Myh4Q5SX39 1939 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Otud7bB2RUR8 840 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Stk10O55098 966 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 PparaP23204 468 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Mphosph8Q3TYA6 858 aaKnown RBP12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ccdc51Q3URS9 406 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tspyl3Q3UYP3 334 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Pde5aQ8CG03 865 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Washc1Q8VDD8 475 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Slc44a4Q91VA1 707 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tubgcp4Q9D4F8 667 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Styxl1Q9DAR2 321 aa12.49□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cfap44E9Q5M6 1843 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Col22a1E9Q7P1 1613 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Adgra3Q7TT36 1310 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Nup62clA2AG10 272 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Fam129cD3YZB0 591 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gm45837F7D3W5 961 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Terf1P70371 421 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Drp2Q05AA6 957 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Sun3Q5SS91 320 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cyp4x1Q6A152 507 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 HltfQ6PCN7 1003 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Scfd2Q8BTY8 684 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Sh3rf3Q8C120 878 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ces1fQ91WU0 561 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Bag2Q91YN9 210 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Prmt3Q922H1 532 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Pde2aQ922S4 916 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ubxn11Q9D572 484 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Smco2Q9DA21 347 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 1700018B08RikQ9DA83 213 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Speer3W4VSP1 261 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Lrp5Q91VN0 1614 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 IqccA2ADZ8 418 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 GzmgP13366 248 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Akr1b8P45377 316 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Fam89aQ14BJ1 175 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Spg7Q3ULF4 781 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Sec31aQ3UPL0 1230 aaKnown RBP12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 SlmapQ3URD3 845 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Lamc2Q61092 1191 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Igbp1Q61249 340 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Slc35c2Q8VCX2 364 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 StambpQ9CQ26 424 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Lama4P97927 1816 aa12.48□□□□□ -0.41
Sdc1-201ENSMUST00000020911 LtbrP50284 415 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Sec23aQ01405 765 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 EnahQ03173 802 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Smcr8Q3UMB5 935 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Syce2Q505B8 171 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cdc14aQ6GQT0 603 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Clec16aQ80U30 1036 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Azin2Q8BVM4 459 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Nod2Q8K3Z0 1020 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ubxn6Q99PL6 442 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 PigrO70570 771 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Psmc4P54775 418 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cops2P61202 443 aaKnown RBP12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Fam210aQ8BGY7 273 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cnot10Q8BH15 744 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tmco6Q8BQX5 494 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Snx8Q8CFD4 459 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Prl7b1Q8CGZ9 251 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Aldh1b1Q9CZS1 519 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Stx17Q9D0I4 301 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tmem68Q9D850 329 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Scgb2b20Q9JI02 112 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Hic2Q9JLZ6 619 aaKnown RBP12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Rnf4Q9QZS2 194 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Krt71Q9R0H5 524 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Sorbs3Q9R1Z8 733 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gdf11Q9Z1W4 405 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Pitpnm2Q6ZPQ6 1335 aa12.47□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Atp2c2A7L9Z8 944 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Lzts1P60853 599 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Zfp957Q3UT76 567 aa12.46□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cacna2d4Q5RJF7 1116 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms