RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gap43P06837 227 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Cacnb3P54285 484 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Krt31Q61765 416 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 CrkQ64010 304 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ms4a5Q810P8 197 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Def6Q8C2K1 630 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Anapc4Q91W96 807 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Aipl1Q924K1 328 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ergic2Q9CR89 377 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Mageb16Q9CWV4 363 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Dydc1Q9D9T0 175 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Ptf1aQ9QX98 324 aa20.47■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 ChkbO55229 394 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Mmp14P53690 582 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Rnpc3Q3UZ01 514 aaKnown RBP20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Fam177a1Q8BR63 207 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 IarsQ8BU30 1262 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Zfp446Q8C9M8 523 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Cbwd1Q8VEH6 393 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Gjc1P28229 396 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Clul1Q3ZRW6 464 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Gm5935Q497S0 212 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Specc1Q5SXY1 1067 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Phf20Q8BLG0 1010 aaKnown RBP20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Scfd1Q8BRF7 639 aaKnown RBP20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Stat2Q9WVL2 923 aa20.46■□□□□ 0.87
Shkbp1-201ENSMUST00000003857 Rpl13P47963 211 aaKnown RBP20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Chrna5Q2MKA5 467 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 KhsrpQ3U0V1 748 aaKnown RBP20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Rapgef1Q3UHC1 1224 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Acbd5Q5XG73 508 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Fbxo11Q7TPD1 930 aaKnown RBP20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Baiap3Q80TT2 1134 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 GopcQ8BH60 463 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Scyl2Q8CFE4 930 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 PdxkQ8K183 312 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Galnt15Q9D2N8 638 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 AvenQ9D9K3 342 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Azi2Q9QYP6 405 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Osbpl9A2A8Z1 736 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Gm3095E9Q058 166 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 FosP01101 380 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 AdkP55264 361 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Polr2fP61219 127 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Cul4aQ3TCH7 759 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Gdpd4Q3TT99 632 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Xxylt1Q3U4G3 392 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Psmd5Q8BJY1 504 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Lgi2Q8K4Z0 550 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Vwa5aQ99KC8 793 aaKnown RBP20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Fam173bQ9D1Z3 247 aa20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ascc1Q9D8Z1 356 aaKnown RBP20.45■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 AoahO35298 574 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 H2afzP0C0S6 128 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ap1m1P35585 423 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Atp6v1aP50516 617 aaKnown RBP20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Znf367Q0VDT2 340 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 H2afvQ3THW5 128 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Igf2bp2Q5SF07 592 aaKnown RBP20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 R3hdm2Q80TM6 1044 aaKnown RBP20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 SucoQ8C341 1250 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Atxn7Q8R4I1 867 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Mettl13Q91YR5 698 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Eya4Q9Z191 616 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Gm28510A0A087WP28 240 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Xirp1O70373 1129 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 E2f5Q61502 335 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 FdxrQ61578 494 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Bud13Q8R149 637 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Chn1Q91V57 459 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Pstpip2Q99M15 334 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ifi202Q9R002 445 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Cul1Q9WTX6 776 aa20.44■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ifi207E9Q3L4 978 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 OatP29758 439 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 GalcP54818 684 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Rgs9bpQ148R9 237 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Cacna2d4Q5RJF7 1116 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Anks6Q6GQX6 883 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Skor1Q8BX46 964 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Dcaf8Q8N7N5 591 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Mroh9G5E8L9 891 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ctage5Q8R311 779 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Havcr2Q8VIM0 281 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Ndufab1Q9CR21 156 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Rasgef1cQ9D300 466 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Q9D5Q8 446 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Fmnl1Q9JL26 1094 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Phtf1Q9QZ09 761 aa20.43■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Mybpc2Q5XKE0 1136 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Lamc2Q61092 1191 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Hoxa13Q62424 386 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Tbc1d10cQ8C9V1 444 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 WaslQ91YD9 501 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Senp2Q91ZX6 588 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Gmcl1Q920G9 524 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Lbhd1A0A087WPA0 259 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Flvcr1B2RXV4 560 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Myo1fP70248 1099 aa20.42■□□□□ 0.86
Shkbp1-201ENSMUST00000003857 Zic5Q7TQ40 622 aa20.42■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms