RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	SPO12	P17123	173 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	DBR1	P24309	405 aa	Known RBP	4.08	□□□□□ -1.76
CMR3	YPR013C	EFB1	P32471	206 aa	Known RBP	4.08	□□□□□ -1.76
CMR3	YPR013C	ERG1	P32476	496 aa	Known RBP	4.08	□□□□□ -1.76
CMR3	YPR013C	RTC2	P38279	296 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	BZZ1	P38822	633 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	PCL6	P40038	420 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	LYS12	P40495	371 aa	Known RBP	4.08	□□□□□ -1.76
CMR3	YPR013C	GUF1	P46943	645 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	GTO1	P48239	356 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	RIB4	P50861	169 aa	Predicted RBP	4.08	□□□□□ -1.76
CMR3	YPR013C	NUP84	P52891	726 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	DBP6	P53734	629 aa	Known RBP	4.08	□□□□□ -1.76
CMR3	YPR013C	YNR048W	P53740	393 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	RLI1	Q03195	608 aa	Known RBP	4.08	□□□□□ -1.76
CMR3	YPR013C	YDR415C	Q04033	374 aa	Predicted RBP	4.08	□□□□□ -1.76
CMR3	YPR013C	AIM33	Q04516	312 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	MRPL35	Q06678	367 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	VAC14	Q06708	880 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	ASA1	Q06822	443 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	RRT8	Q08219	342 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	MUM3	Q08750	479 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	SRL2	Q12020	392 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	SPO24	Q3E752	67 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	TAD3	Q9URQ3	322 aa		4.08	□□□□□ -1.76
CMR3	YPR013C	TEF1	P02994	458 aa	Known RBP	4.07	□□□□□ -1.76
CMR3	YPR013C	ATP1	P07251	545 aa	Known RBP	4.07	□□□□□ -1.76
CMR3	YPR013C	RPL42A	P0CX27	106 aa	Known RBP	4.07	□□□□□ -1.76
CMR3	YPR013C	RPL42B	P0CX28	106 aa	Known RBP	4.07	□□□□□ -1.76
CMR3	YPR013C	CLN3	P13365	580 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	YPS1	P32329	569 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	YKL070W	P36087	169 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	MRPL37	P36532	105 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	LCP5	P40079	357 aa	Predicted RBP	4.07	□□□□□ -1.76
CMR3	YPR013C	GCD14	P46959	383 aa	Predicted RBP	4.07	□□□□□ -1.76
CMR3	YPR013C	GWT1	P47026	490 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	SSN8	P47821	323 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	BET4	Q00618	327 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	YPL068C	Q02749	293 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	APC4	Q04601	652 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	ERV41	Q04651	352 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	YOL075C	Q08234	1294 aa		4.07	□□□□□ -1.76
CMR3	YPR013C	HEM2	P05373	342 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	TPK3	P05986	398 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	YER190C-B	P0CX94	160 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	YEL077W-A	P0CX95	160 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	YGR296C-B	P0CX96	160 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	YPL283W-B	P0CX97	160 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	YPR204C-A	P0CX98	160 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	TIP1	P27654	210 aa	Predicted RBP	4.06	□□□□□ -1.76
CMR3	YPR013C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
CMR3	YPR013C	SIP2	P34164	415 aa	Known RBP	4.06	□□□□□ -1.76
CMR3	YPR013C	SKT5	P34226	696 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	YMR134W	P40207	237 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	AGX1	P43567	385 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	LOH1	P47055	219 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	EMC2	P47133	292 aa	Known RBP	4.06	□□□□□ -1.76
CMR3	YPR013C	YGR266W	P53326	701 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	RPL15B	P54780	204 aa	Predicted RBP	4.06	□□□□□ -1.76
CMR3	YPR013C	MRP51	Q02950	344 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	YMR254C	Q04838	102 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	GEP3	Q08622	556 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	TIM18	Q08749	192 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	RGS2	Q99188	309 aa		4.06	□□□□□ -1.76
CMR3	YPR013C	SSA3	P09435	649 aa	Known RBP	4.05	□□□□□ -1.76
CMR3	YPR013C	RPL18A	P0CX49	186 aa	Known RBP	4.05	□□□□□ -1.76
CMR3	YPR013C	RPL18B	P0CX50	186 aa	Known RBP	4.05	□□□□□ -1.76
CMR3	YPR013C	MSS116	P15424	664 aa	Known RBP	4.05	□□□□□ -1.76
CMR3	YPR013C	CKI1	P20485	582 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	AIM17	P23180	465 aa	Known RBP	4.05	□□□□□ -1.76
CMR3	YPR013C	MNS1	P32906	549 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	BUD2	P33314	1104 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	YKL097C	P34245	136 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	YJL070C	P40361	888 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	AZF1	P41696	914 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	LAM5	P43560	674 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	TOS3	P43637	560 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	YDL186W	P48568	277 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	MND1	P53102	219 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	MPP6	P53725	186 aa	Predicted RBP	4.05	□□□□□ -1.76
CMR3	YPR013C	SMP3	Q04174	516 aa		4.05	□□□□□ -1.76
CMR3	YPR013C	SGT2	Q12118	346 aa	Known RBP	4.05	□□□□□ -1.76
CMR3	YPR013C	PAA1	Q12447	191 aa	Known RBP	4.05	□□□□□ -1.76
CMR3	YPR013C	TDH1	P00360	332 aa	Known RBP	4.04	□□□□□ -1.76
CMR3	YPR013C	RPS16A	P0CX51	143 aa	Known RBP	4.04	□□□□□ -1.76
CMR3	YPR013C	RPS16B	P0CX52	143 aa	Known RBP	4.04	□□□□□ -1.76
CMR3	YPR013C	MDM10	P18409	493 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	MRPL8	P22353	238 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	MEK1	P24719	497 aa	Predicted RBP	4.04	□□□□□ -1.76
CMR3	YPR013C	CIN8	P27895	1000 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	GLC7	P32598	312 aa	Known RBP	4.04	□□□□□ -1.76
CMR3	YPR013C	TOA2	P32774	122 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	YIR014W	P40570	242 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	GCD10	P41814	478 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	PSA1	P41940	361 aa	Known RBP	4.04	□□□□□ -1.76
CMR3	YPR013C	TOS2	P50078	622 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	YGL185C	P53100	379 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	POP6	P53218	158 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	YGR117C	P53270	476 aa		4.04	□□□□□ -1.76
CMR3	YPR013C	ARK1	P53974	638 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms