RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	YFT2	Q06676	274 aa		4.37	□□□□□ -1.71
TRE1	YPL176C	POS5	Q06892	414 aa		4.37	□□□□□ -1.71
TRE1	YPL176C	YDL114W	Q07530	308 aa		4.37	□□□□□ -1.71
TRE1	YPL176C	TPO1	Q07824	586 aa		4.37	□□□□□ -1.71
TRE1	YPL176C	PRP46	Q12417	451 aa	Predicted RBP	4.37	□□□□□ -1.71
TRE1	YPL176C	LSO2	Q3E772	92 aa	Known RBP	4.37	□□□□□ -1.71
TRE1	YPL176C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
TRE1	YPL176C	GPH1	P06738	902 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	RPL18A	P0CX49	186 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	RPL18B	P0CX50	186 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	MAS1	P10507	462 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	PRP4	P20053	465 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	VPS34	P22543	875 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	GPI12	P23797	304 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	DSS4	P32601	143 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	SKG6	P32900	734 aa	Predicted RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	TRM2	P33753	639 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	SKT5	P34226	696 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	YPK3	P38070	525 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	PRP39	P39682	629 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	SAP1	P39955	897 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	YER121W	P40076	114 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	MSE1	P48525	536 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	STB4	P50104	949 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	YMR310C	Q04867	317 aa	Predicted RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	SPO77	Q06134	477 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
TRE1	YPL176C	YLR108C	Q12259	485 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	RMD5	Q12508	421 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	ATP1	P07251	545 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	GDH1	P07262	454 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	SPE1	P08432	466 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	FRS2	P15625	503 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	DEG1	P31115	442 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	GSH1	P32477	678 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	RPC34	P32910	317 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	CBT1	P36038	271 aa	Predicted RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	DUG2	P38149	878 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	MMS21	P38632	267 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	FET3	P38993	636 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	TFG2	P41896	400 aa	Predicted RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	SPG5	P42933	373 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	VAC7	P53950	1165 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	IZH1	Q03419	316 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	PLB2	Q03674	706 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	NSE1	Q07913	336 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	DNL4	Q08387	944 aa	Predicted RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	BAG7	Q12128	409 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	YCL012C	Q8J0M4	134 aa		4.36	□□□□□ -1.71
TRE1	YPL176C	RPO21	P04050	1733 aa	Known RBP	4.36	□□□□□ -1.71
TRE1	YPL176C	THP2	O13539	261 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	ADH2	P00331	348 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	GAL10	P04397	699 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	NFT1	P0CE68	1218 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	REV1	P12689	985 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	SNF6	P18888	332 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	ISY1	P21374	235 aa	Predicted RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	RPL24B	P24000	155 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	YCR015C	P25616	317 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	MSS51	P32335	436 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	YSC83	P32792	385 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	RFT1	P38206	574 aa	Predicted RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	GET2	P40056	285 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	YJL163C	P46996	555 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	YGL159W	P53110	370 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	LSG1	P53145	640 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	YGR079W	P53249	370 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	ASI2	P53895	289 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	PRM15	Q03262	622 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	GCN5	Q03330	439 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	FRE5	Q08908	694 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	YBR255C-A	Q3E776	120 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	HRP1	Q99383	534 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	SPS4	P09937	338 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	RPS16A	P0CX51	143 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	RPS16B	P0CX52	143 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	SRP54	P20424	541 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	YSR3	P23501	404 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	RBK1	P25332	333 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	IMG1	P25626	169 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	NTR2	P36118	322 aa	Predicted RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	PRS4	P38063	326 aa	Predicted RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	DIA4	P38705	446 aa	Predicted RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	ARO9	P38840	513 aa	Predicted RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	GIM4	P40005	111 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	YER137C	P40083	148 aa	Known RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	COX16	P47081	118 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	YJR056C	P47115	236 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	SSN8	P47821	323 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	NOP19	P53317	196 aa	Predicted RBP	4.35	□□□□□ -1.71
TRE1	YPL176C	MDM30	Q05930	598 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	CYK3	Q07533	885 aa		4.35	□□□□□ -1.71
TRE1	YPL176C	HIS4	P00815	799 aa	Known RBP	4.34	□□□□□ -1.71
TRE1	YPL176C	FBA1	P14540	359 aa	Known RBP	4.34	□□□□□ -1.71
TRE1	YPL176C	VPS1	P21576	704 aa	Known RBP	4.34	□□□□□ -1.71
TRE1	YPL176C	RRT12	P25381	491 aa		4.34	□□□□□ -1.71
TRE1	YPL176C	CSM1	P25651	190 aa		4.34	□□□□□ -1.71
TRE1	YPL176C	NAM9	P27929	486 aa		4.34	□□□□□ -1.71
TRE1	YPL176C	AST1	P35183	429 aa		4.34	□□□□□ -1.71
TRE1	YPL176C	RTC2	P38279	296 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 93.3 ms