RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W MRPS17Q03246 237 aaPredicted RBP1.87□□□□□ -2.11
CFT2YLR115W LOT6Q07923 191 aa1.87□□□□□ -2.11
CFT2YLR115W YOL159CQ08300 171 aa1.87□□□□□ -2.11
CFT2YLR115W ETT1Q08421 412 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W LEU9Q12166 604 aaKnown RBP1.87□□□□□ -2.11
CFT2YLR115W SEY1Q99287 776 aa1.87□□□□□ -2.11
CFT2YLR115W CDC21P06785 304 aa1.86□□□□□ -2.11
CFT2YLR115W ARO3P14843 370 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W UBA1P22515 1024 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W CRM1P30822 1084 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W AFG1P32317 509 aa1.86□□□□□ -2.11
CFT2YLR115W SPR1P32603 445 aa1.86□□□□□ -2.11
CFT2YLR115W YKR015CP36111 568 aa1.86□□□□□ -2.11
CFT2YLR115W VPS51P36116 164 aa1.86□□□□□ -2.11
CFT2YLR115W FAD1P38913 306 aa1.86□□□□□ -2.11
CFT2YLR115W SHQ1P40486 507 aaPredicted RBP1.86□□□□□ -2.11
CFT2YLR115W FMC1P40491 155 aa1.86□□□□□ -2.11
CFT2YLR115W MSS2P40990 351 aa1.86□□□□□ -2.11
CFT2YLR115W ELP2P42935 788 aa1.86□□□□□ -2.11
CFT2YLR115W ATG27P46989 271 aa1.86□□□□□ -2.11
CFT2YLR115W YJL132WP47014 750 aa1.86□□□□□ -2.11
CFT2YLR115W PKP2P53170 491 aa1.86□□□□□ -2.11
CFT2YLR115W DRN1P53255 507 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W MRPL50P53724 139 aa1.86□□□□□ -2.11
CFT2YLR115W YMR102CQ03177 834 aa1.86□□□□□ -2.11
CFT2YLR115W ARP10Q04549 284 aa1.86□□□□□ -2.11
CFT2YLR115W SOV1Q04748 898 aa1.86□□□□□ -2.11
CFT2YLR115W ARR2Q06597 130 aa1.86□□□□□ -2.11
CFT2YLR115W SHS1Q07657 551 aa1.86□□□□□ -2.11
CFT2YLR115W MSF1P08425 469 aa1.86□□□□□ -2.11
CFT2YLR115W RNR2P09938 399 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W UGA1P17649 471 aa1.86□□□□□ -2.11
CFT2YLR115W SPO7P18410 259 aa1.86□□□□□ -2.11
CFT2YLR115W DAP2P18962 818 aa1.86□□□□□ -2.11
CFT2YLR115W DAL81P21657 970 aa1.86□□□□□ -2.11
CFT2YLR115W CMK2P22517 447 aa1.86□□□□□ -2.11
CFT2YLR115W PPH22P23595 377 aa1.86□□□□□ -2.11
CFT2YLR115W BUD14P27637 709 aa1.86□□□□□ -2.11
CFT2YLR115W REC114P32841 428 aa1.86□□□□□ -2.11
CFT2YLR115W YKL070WP36087 169 aa1.86□□□□□ -2.11
CFT2YLR115W ARA1P38115 344 aa1.86□□□□□ -2.11
CFT2YLR115W KAP104P38217 918 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W PET100P38958 111 aa1.86□□□□□ -2.11
CFT2YLR115W SUR2P38992 349 aa1.86□□□□□ -2.11
CFT2YLR115W IME4P41833 600 aa1.86□□□□□ -2.11
CFT2YLR115W YFR020WP43600 232 aa1.86□□□□□ -2.11
CFT2YLR115W GTO1P48239 356 aa1.86□□□□□ -2.11
CFT2YLR115W TOM22P49334 152 aa1.86□□□□□ -2.11
CFT2YLR115W APT1P49435 187 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W STR3P53101 465 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W SKO1Q02100 647 aa1.86□□□□□ -2.11
CFT2YLR115W RLI1Q03195 608 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W FIN1Q03898 291 aa1.86□□□□□ -2.11
CFT2YLR115W ECM11Q04110 302 aa1.86□□□□□ -2.11
CFT2YLR115W VPS20Q04272 221 aa1.86□□□□□ -2.11
CFT2YLR115W URC2Q04411 772 aa1.86□□□□□ -2.11
CFT2YLR115W SMA2Q04658 369 aa1.86□□□□□ -2.11
CFT2YLR115W MRPL35Q06678 367 aa1.86□□□□□ -2.11
CFT2YLR115W YPR078CQ06813 372 aa1.86□□□□□ -2.11
CFT2YLR115W BRX1Q08235 291 aaKnown RBP1.86□□□□□ -2.11
CFT2YLR115W ROM2P51862 1356 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W FKS3Q04952 1785 aa1.85□□□□□ -2.11
CFT2YLR115W MF(ALPHA)1P01149 165 aa1.85□□□□□ -2.11
CFT2YLR115W HXK2P04807 486 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W NHP6BP11633 99 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W RAP1P11938 827 aa1.85□□□□□ -2.11
CFT2YLR115W YPK2P18961 677 aa1.85□□□□□ -2.11
CFT2YLR115W PPA2P28239 310 aa1.85□□□□□ -2.11
CFT2YLR115W IDH2P28241 369 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W PRS1P32895 427 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W SKG6P32900 734 aaPredicted RBP1.85□□□□□ -2.11
CFT2YLR115W GDH2P33327 1092 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W LHS1P36016 881 aa1.85□□□□□ -2.11
CFT2YLR115W YPT52P36018 234 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W TUL1P36096 758 aa1.85□□□□□ -2.11
CFT2YLR115W YKL023WP36103 277 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W POP7P38291 140 aa1.85□□□□□ -2.11
CFT2YLR115W MMS21P38632 267 aa1.85□□□□□ -2.11
CFT2YLR115W RCY1P39531 840 aa1.85□□□□□ -2.11
CFT2YLR115W RTS2P40962 232 aa1.85□□□□□ -2.11
CFT2YLR115W SMC3P47037 1230 aa1.85□□□□□ -2.11
CFT2YLR115W PIB2P53191 635 aa1.85□□□□□ -2.11
CFT2YLR115W IPI3P53877 555 aa1.85□□□□□ -2.11
CFT2YLR115W VAC7P53950 1165 aa1.85□□□□□ -2.11
CFT2YLR115W RPA49Q01080 415 aaPredicted RBP1.85□□□□□ -2.11
CFT2YLR115W NUP100Q02629 959 aa1.85□□□□□ -2.11
CFT2YLR115W CTL1Q03220 320 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W YMR226CQ05016 267 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W DIS3Q08162 1001 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W GET4Q12125 312 aa1.85□□□□□ -2.11
CFT2YLR115W BSC1Q12140 328 aa1.85□□□□□ -2.11
CFT2YLR115W LSP1Q12230 341 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W SRN2Q99176 213 aa1.85□□□□□ -2.11
CFT2YLR115W BRR1Q99177 341 aaPredicted RBP1.85□□□□□ -2.11
CFT2YLR115W YOS9Q99220 542 aa1.85□□□□□ -2.11
CFT2YLR115W VCX1Q99385 411 aa1.85□□□□□ -2.11
CFT2YLR115W ARG4P04076 463 aaPredicted RBP1.85□□□□□ -2.11
CFT2YLR115W GPH1P06738 902 aaKnown RBP1.85□□□□□ -2.11
CFT2YLR115W YAK1P14680 807 aa1.85□□□□□ -2.11
CFT2YLR115W VPS1P21576 704 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms