RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YNL115CP53925 644 aa2.23□□□□□ -2.05
CSF1YLR087C YDR179W-AQ03983 463 aa2.23□□□□□ -2.05
CSF1YLR087C YLR297WQ05899 129 aa2.23□□□□□ -2.05
CSF1YLR087C HTZ1Q12692 134 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C YDR157WA0A023PZE8 133 aa2.23□□□□□ -2.05
CSF1YLR087C CTA1P15202 515 aa2.23□□□□□ -2.05
CSF1YLR087C VPS17P32913 551 aa2.23□□□□□ -2.05
CSF1YLR087C APD1P38281 316 aa2.23□□□□□ -2.05
CSF1YLR087C YMR1P47147 688 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
CSF1YLR087C STR3P53101 465 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C BSC5P53755 489 aa2.23□□□□□ -2.05
CSF1YLR087C SMA1Q02651 245 aa2.23□□□□□ -2.05
CSF1YLR087C TY3A-GQ12173 290 aa2.23□□□□□ -2.05
CSF1YLR087C RMP1Q12530 201 aa2.23□□□□□ -2.05
CSF1YLR087C TY3A-IQ99219 290 aa2.23□□□□□ -2.05
CSF1YLR087C RAM2P29703 316 aa2.23□□□□□ -2.05
CSF1YLR087C MSS1P32559 526 aaPredicted RBP2.23□□□□□ -2.05
CSF1YLR087C REG2P38232 338 aa2.23□□□□□ -2.05
CSF1YLR087C ECL1P48235 211 aa2.23□□□□□ -2.05
CSF1YLR087C VOA1P53262 265 aa2.23□□□□□ -2.05
CSF1YLR087C YGR164WP53291 111 aa2.23□□□□□ -2.05
CSF1YLR087C RPN9Q04062 393 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C TRS120Q04183 1289 aa2.23□□□□□ -2.05
CSF1YLR087C DPL1Q05567 589 aa2.23□□□□□ -2.05
CSF1YLR087C PBS2P08018 668 aa2.23□□□□□ -2.05
CSF1YLR087C CAP2P13517 287 aa2.23□□□□□ -2.05
CSF1YLR087C MCM5P29496 775 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C HIS7P33734 552 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C LYS9P38999 446 aa2.23□□□□□ -2.05
CSF1YLR087C ERV46P39727 415 aa2.23□□□□□ -2.05
CSF1YLR087C IES2P40154 320 aa2.23□□□□□ -2.05
CSF1YLR087C DBP6P53734 629 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C REC102Q02721 264 aa2.23□□□□□ -2.05
CSF1YLR087C SHH3Q04487 196 aa2.23□□□□□ -2.05
CSF1YLR087C MRPL1Q04599 285 aa2.23□□□□□ -2.05
CSF1YLR087C HEM25Q07534 307 aa2.23□□□□□ -2.05
CSF1YLR087C ACK1Q07622 623 aaPredicted RBP2.23□□□□□ -2.05
CSF1YLR087C SYC1Q08553 188 aaPredicted RBP2.23□□□□□ -2.05
CSF1YLR087C RRP42Q12277 265 aaPredicted RBP2.23□□□□□ -2.05
CSF1YLR087C TY2B-LR1P0C2J3 1770 aa2.23□□□□□ -2.05
CSF1YLR087C TY2B-FP0CX63 1770 aa2.23□□□□□ -2.05
CSF1YLR087C TY2B-GR2P0CX64 1770 aa2.23□□□□□ -2.05
CSF1YLR087C TY2B-CP25384 1770 aa2.23□□□□□ -2.05
CSF1YLR087C TY2B-DR2Q03494 1770 aa2.23□□□□□ -2.05
CSF1YLR087C TY1B-DR1Q03855 1755 aa2.23□□□□□ -2.05
CSF1YLR087C TY2B-DR3Q07791 1770 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C TY2B-OR1Q12113 1770 aa2.23□□□□□ -2.05
CSF1YLR087C TY2B-DR1Q12472 1770 aa2.23□□□□□ -2.05
CSF1YLR087C TY2B-OR2Q12501 1770 aa2.23□□□□□ -2.05
CSF1YLR087C LAA1P39526 2014 aa2.23□□□□□ -2.05
CSF1YLR087C FOB1O13329 566 aa2.23□□□□□ -2.05
CSF1YLR087C REV1P12689 985 aa2.23□□□□□ -2.05
CSF1YLR087C CPS1P27614 576 aa2.23□□□□□ -2.05
CSF1YLR087C ERG1P32476 496 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C PDX3P38075 228 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C PFS1P38872 237 aa2.23□□□□□ -2.05
CSF1YLR087C RPN10P38886 268 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C MEP1P40260 492 aa2.23□□□□□ -2.05
CSF1YLR087C FKH1P40466 484 aa2.23□□□□□ -2.05
CSF1YLR087C CFD1P40558 293 aa2.23□□□□□ -2.05
CSF1YLR087C TPN1P53099 579 aa2.23□□□□□ -2.05
CSF1YLR087C PUS6P53294 404 aa2.23□□□□□ -2.05
CSF1YLR087C YNL146WP53906 100 aa2.23□□□□□ -2.05
CSF1YLR087C FRA1Q07825 749 aa2.23□□□□□ -2.05
CSF1YLR087C RCN2Q12044 265 aa2.23□□□□□ -2.05
CSF1YLR087C PKH2Q12236 1081 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C YKL023C-AQ2V2P3 75 aa2.23□□□□□ -2.05
CSF1YLR087C POL2P21951 2222 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C ATG15P25641 520 aa2.23□□□□□ -2.05
CSF1YLR087C ARP2P32381 391 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C AIM29P36154 155 aa2.23□□□□□ -2.05
CSF1YLR087C SDH8P38345 138 aa2.23□□□□□ -2.05
CSF1YLR087C LRP1P38801 184 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C ALR2P43553 858 aa2.23□□□□□ -2.05
CSF1YLR087C ERP6P53198 216 aa2.23□□□□□ -2.05
CSF1YLR087C YNL140CP53910 189 aa2.23□□□□□ -2.05
CSF1YLR087C YDR391CQ04170 232 aa2.23□□□□□ -2.05
CSF1YLR087C PDH1Q12428 516 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C SEC53P07283 254 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C HOP1P20050 605 aa2.23□□□□□ -2.05
CSF1YLR087C RFA1P22336 621 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C SAN1P22470 610 aa2.23□□□□□ -2.05
CSF1YLR087C GUT2P32191 649 aa2.23□□□□□ -2.05
CSF1YLR087C PRP21P32524 280 aaPredicted RBP2.23□□□□□ -2.05
CSF1YLR087C YEF1P32622 495 aa2.23□□□□□ -2.05
CSF1YLR087C BOL3P39724 118 aa2.23□□□□□ -2.05
CSF1YLR087C PMT4P46971 762 aa2.23□□□□□ -2.05
CSF1YLR087C CTR1P49573 406 aa2.23□□□□□ -2.05
CSF1YLR087C SOL1P50278 321 aa2.23□□□□□ -2.05
CSF1YLR087C FLC3P53121 802 aa2.23□□□□□ -2.05
CSF1YLR087C MEP3P53390 489 aa2.23□□□□□ -2.05
CSF1YLR087C GIS1Q03833 894 aa2.23□□□□□ -2.05
CSF1YLR087C CSI1Q04368 295 aa2.23□□□□□ -2.05
CSF1YLR087C TDA5Q06417 326 aaKnown RBP2.23□□□□□ -2.05
CSF1YLR087C CUR1Q06469 252 aa2.23□□□□□ -2.05
CSF1YLR087C MOT1P32333 1867 aa2.22□□□□□ -2.05
CSF1YLR087C SIR2P06700 562 aa2.22□□□□□ -2.05
CSF1YLR087C PHO13P19881 312 aa2.22□□□□□ -2.05
CSF1YLR087C SPC29P33419 253 aa2.22□□□□□ -2.05
CSF1YLR087C POL12P38121 705 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms