RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	BCH1	Q05029	724 aa		5.09	□□□□□ -1.59
RRN3	YKL125W	RAD34	Q06665	692 aa		5.09	□□□□□ -1.59
RRN3	YKL125W	YET3	Q07451	203 aa		5.09	□□□□□ -1.59
RRN3	YKL125W	FMP25	Q08023	583 aa		5.09	□□□□□ -1.59
RRN3	YKL125W	OPI10	Q08202	246 aa		5.09	□□□□□ -1.59
RRN3	YKL125W	AAD15	Q08361	143 aa		5.09	□□□□□ -1.59
RRN3	YKL125W	FAL1	Q12099	399 aa	Known RBP	5.09	□□□□□ -1.59
RRN3	YKL125W	YPR014C	Q6B0W2	109 aa		5.09	□□□□□ -1.59
RRN3	YKL125W	CDC4	P07834	779 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	COS2	P0CX12	379 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	COS3	P0CX13	379 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	RPL4A	P10664	362 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	UTR1	P21373	530 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	RPS1B	P23248	255 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	RPI1	P23250	407 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	KAR4	P25583	335 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	MGT1	P26188	188 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	LAC1	P28496	418 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	RGT1	P32862	1170 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	BEM3	P32873	1128 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	RPS1A	P33442	255 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	TSA1	P34760	196 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	SRY1	P36007	326 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	TCM62	P38228	572 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	ARN2	P38724	620 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	YHR054C	P38780	354 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	DHH1	P39517	506 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	YMR147W	P40218	223 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	YIL165C	P40446	119 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	FAR3	P46671	204 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	ARC1	P46672	376 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	RPL4B	P49626	362 aa	Known RBP	5.09	□□□□□ -1.6
RRN3	YKL125W	TIM13	P53299	105 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	GPI1	P53306	609 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	HDA1	P53973	706 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	YPL113C	Q02961	396 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	PRM15	Q03262	622 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	YLR283W	Q05867	314 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	PCC1	Q3E833	88 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	RIB3	Q99258	208 aa		5.09	□□□□□ -1.6
RRN3	YKL125W	YRF1-1	P0CX20	1796 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	YRF1-5	P0CX21	1796 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	YRF1-8	P0CX22	1796 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	MET16	P18408	261 aa	Predicted RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	RNA14	P25298	677 aa	Known RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	RRP7	P25368	297 aa	Predicted RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	POF1	P25576	258 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	PHO11	P35842	467 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	AIM29	P36154	155 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	MRPL15	P36523	253 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	SOL2	P37262	315 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	ECM8	P38246	354 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	SHG1	P38337	142 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	PCM1	P38628	557 aa	Known RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	PHO12	P38693	467 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	SOP4	P39543	234 aa	Predicted RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	UIP3	P39547	235 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	VRG4	P40107	337 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	LAS21	P40367	830 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	ATM1	P40416	690 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	YIL024C	P40543	189 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	SIP4	P46954	829 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	YJR111C	P47148	283 aa	Known RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	RTA1	P53047	317 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	RRN9	P53437	365 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	YNR065C	P53751	1116 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	MRPL22	P53881	309 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	GRX5	Q02784	150 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	YPL071C	Q02864	156 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	RMT2	Q03305	412 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	EFR3	Q03653	782 aa	Known RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	YHC1	Q05900	231 aa	Known RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	YPR147C	Q06522	304 aa	Known RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	OPT2	Q06593	877 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	SPC3	Q12133	184 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	TRM10	Q12400	293 aa		5.08	□□□□□ -1.6
RRN3	YKL125W	ERG27	Q12452	347 aa	Known RBP	5.08	□□□□□ -1.6
RRN3	YKL125W	STF1	P01098	86 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	TRP4	P07285	380 aa	Predicted RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	FUM1	P08417	488 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	SSA3	P09435	649 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	DBR1	P24309	405 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	SAT4	P25333	603 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	DAL2	P25335	343 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	RIM2	P38127	377 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	FMP23	P38231	175 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	IPT1	P38954	527 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	XDJ1	P39102	459 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	PCL6	P40038	420 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	MPS3	P47069	682 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	PTK2	P47116	818 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	YJR115W	P47152	169 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	YGL039W	P53183	348 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	SLX9	P53251	210 aa	Predicted RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	HST3	P53687	447 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	ERV25	P54837	211 aa	Known RBP	5.07	□□□□□ -1.6
RRN3	YKL125W	MRPS16	Q02608	121 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	TRS130	Q03660	1102 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	SEN15	Q04675	128 aa		5.07	□□□□□ -1.6
RRN3	YKL125W	YPL199C	Q08954	240 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms