RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W SLY41P22215 453 aa13.05□□□□□ -0.32
RPN10YHR200W TDA11P38854 504 aa13.05□□□□□ -0.32
RPN10YHR200W ELP4Q02884 456 aaKnown RBP13.05□□□□□ -0.32
RPN10YHR200W IMG1P25626 169 aa13.04□□□□□ -0.32
RPN10YHR200W GDH2P33327 1092 aaKnown RBP13.04□□□□□ -0.32
RPN10YHR200W MSN2P33748 704 aa13.04□□□□□ -0.32
RPN10YHR200W LHS1P36016 881 aa13.04□□□□□ -0.32
RPN10YHR200W SPC42P36094 363 aa13.04□□□□□ -0.32
RPN10YHR200W MPH1P40562 993 aa13.04□□□□□ -0.32
RPN10YHR200W TIM54P47045 478 aa13.04□□□□□ -0.32
RPN10YHR200W AAD10P47182 288 aa13.04□□□□□ -0.32
RPN10YHR200W TWF1P53250 332 aa13.04□□□□□ -0.32
RPN10YHR200W ATF2P53296 535 aa13.04□□□□□ -0.32
RPN10YHR200W ARO10Q06408 635 aa13.04□□□□□ -0.32
RPN10YHR200W GLE1Q12315 538 aa13.04□□□□□ -0.32
RPN10YHR200W MRX4Q12467 430 aa13.04□□□□□ -0.32
RPN10YHR200W NKP1Q12493 238 aa13.04□□□□□ -0.32
RPN10YHR200W SKS1Q12505 502 aa13.04□□□□□ -0.32
RPN10YHR200W YOR019WQ99248 730 aa13.04□□□□□ -0.32
RPN10YHR200W PTP2P29461 750 aa13.03□□□□□ -0.32
RPN10YHR200W ASF2P32448 525 aaPredicted RBP13.03□□□□□ -0.32
RPN10YHR200W CYS4P32582 507 aaKnown RBP13.03□□□□□ -0.32
RPN10YHR200W LHP1P33399 275 aaKnown RBP13.03□□□□□ -0.32
RPN10YHR200W RIM101P33400 625 aa13.03□□□□□ -0.32
RPN10YHR200W TAF14P35189 244 aa13.03□□□□□ -0.32
RPN10YHR200W UTH1P36135 365 aa13.03□□□□□ -0.32
RPN10YHR200W MRPL15P36523 253 aa13.03□□□□□ -0.32
RPN10YHR200W YRB2P40517 327 aa13.03□□□□□ -0.32
RPN10YHR200W YGR079WP53249 370 aa13.03□□□□□ -0.32
RPN10YHR200W RHO1P06780 209 aaKnown RBP13.02□□□□□ -0.33
RPN10YHR200W SIC1P38634 284 aa13.02□□□□□ -0.33
RPN10YHR200W TMA20P89886 181 aaPredicted RBP13.02□□□□□ -0.33
RPN10YHR200W YLR456WQ06199 204 aa13.02□□□□□ -0.33
RPN10YHR200W BSC6Q08280 497 aa13.02□□□□□ -0.33
RPN10YHR200W NRP1P32770 719 aaKnown RBP RIP-Chip data13.01□□□□□ -0.33not detected
RPN10YHR200W PET112P33893 541 aa13.01□□□□□ -0.33
RPN10YHR200W VPS51P36116 164 aa13.01□□□□□ -0.33
RPN10YHR200W RCY1P39531 840 aa13.01□□□□□ -0.33
RPN10YHR200W MET28P40573 187 aa13.01□□□□□ -0.33
RPN10YHR200W HOS2P53096 452 aaPredicted RBP13.01□□□□□ -0.33
RPN10YHR200W ERG13P54839 491 aaKnown RBP13.01□□□□□ -0.33
RPN10YHR200W SWP1Q02795 286 aa13.01□□□□□ -0.33
RPN10YHR200W MHF1Q3E835 90 aa13.01□□□□□ -0.33
RPN10YHR200W CTR86P25355 563 aa13□□□□□ -0.33
RPN10YHR200W ARE1P25628 610 aa13□□□□□ -0.33
RPN10YHR200W SAC1P32368 623 aaKnown RBP13□□□□□ -0.33
RPN10YHR200W TIF3P34167 436 aaKnown RBP13□□□□□ -0.33
RPN10YHR200W YBR238CP38330 731 aaKnown RBP13□□□□□ -0.33
RPN10YHR200W TRR2P38816 342 aa13□□□□□ -0.33
RPN10YHR200W STE24P47154 453 aa13□□□□□ -0.33
RPN10YHR200W YGR168CP53293 376 aa13□□□□□ -0.33
RPN10YHR200W CSL4P53859 292 aaPredicted RBP13□□□□□ -0.33
RPN10YHR200W COG5P53951 403 aa13□□□□□ -0.33
RPN10YHR200W REC102Q02721 264 aa13□□□□□ -0.33
RPN10YHR200W YIM1P28625 365 aa12.99□□□□□ -0.33
RPN10YHR200W YBR285WP38354 144 aa12.99□□□□□ -0.33
RPN10YHR200W FAA3P39002 694 aa12.99□□□□□ -0.33
RPN10YHR200W SPO73P40031 143 aa12.99□□□□□ -0.33
RPN10YHR200W MSS2P40990 351 aa12.99□□□□□ -0.33
RPN10YHR200W SNM1P40993 198 aa12.99□□□□□ -0.33
RPN10YHR200W RAD30Q04049 632 aa12.99□□□□□ -0.33
RPN10YHR200W YPR172WQ06608 200 aa12.99□□□□□ -0.33
RPN10YHR200W SWA2Q06677 668 aa12.99□□□□□ -0.33
RPN10YHR200W REH1Q06709 432 aa12.99□□□□□ -0.33
RPN10YHR200W YPR091CQ06833 770 aa12.99□□□□□ -0.33
RPN10YHR200W DCI1Q08558 271 aa12.99□□□□□ -0.33
RPN10YHR200W BSC1Q12140 328 aa12.99□□□□□ -0.33
RPN10YHR200W SLH1P53327 1967 aaKnown RBP12.99□□□□□ -0.33
RPN10YHR200W TOR1P35169 2470 aa12.98□□□□□ -0.33
RPN10YHR200W PET9P18239 318 aaKnown RBP12.98□□□□□ -0.33
RPN10YHR200W RRP7P25368 297 aaPredicted RBP12.98□□□□□ -0.33
RPN10YHR200W TUL1P36096 758 aa12.98□□□□□ -0.33
RPN10YHR200W BET3P36149 193 aa12.98□□□□□ -0.33
RPN10YHR200W PRM8P53174 237 aa12.98□□□□□ -0.33
RPN10YHR200W CDH1P53197 566 aa12.98□□□□□ -0.33
RPN10YHR200W RNH70P53331 553 aa12.98□□□□□ -0.33
RPN10YHR200W RSF1Q05043 376 aa12.98□□□□□ -0.33
RPN10YHR200W YDR061WQ12298 539 aa12.98□□□□□ -0.33
RPN10YHR200W DBP10Q12389 995 aaKnown RBP12.98□□□□□ -0.33
RPN10YHR200W SEC2P17065 759 aa12.97□□□□□ -0.33
RPN10YHR200W CHA1P25379 360 aaKnown RBP12.97□□□□□ -0.33
RPN10YHR200W PRP21P32524 280 aaPredicted RBP12.97□□□□□ -0.33
RPN10YHR200W YME2P32843 850 aa12.97□□□□□ -0.33
RPN10YHR200W YOR062CP36025 268 aa12.97□□□□□ -0.33
RPN10YHR200W ECM8P38246 354 aa12.97□□□□□ -0.33
RPN10YHR200W YLF2P38746 405 aa12.97□□□□□ -0.33
RPN10YHR200W CFD1P40558 293 aa12.97□□□□□ -0.33
RPN10YHR200W CAK1P43568 368 aaPredicted RBP12.97□□□□□ -0.33
RPN10YHR200W ROM1P53046 1155 aa12.97□□□□□ -0.33
RPN10YHR200W DAM1P53267 343 aa12.97□□□□□ -0.33
RPN10YHR200W YOR214CQ12282 236 aa12.97□□□□□ -0.33
RPN10YHR200W CBS1P14066 229 aa12.96□□□□□ -0.33
RPN10YHR200W THR1P17423 357 aaKnown RBP12.96□□□□□ -0.33
RPN10YHR200W AAC3P18238 307 aa12.96□□□□□ -0.33
RPN10YHR200W SSZ1P38788 538 aaKnown RBP12.96□□□□□ -0.33
RPN10YHR200W TED1P40533 473 aa12.96□□□□□ -0.33
RPN10YHR200W YFL066CP43538 392 aa12.96□□□□□ -0.33
RPN10YHR200W ALK1P43633 760 aaKnown RBP12.96□□□□□ -0.33
RPN10YHR200W BIT61P47041 543 aa12.96□□□□□ -0.33
RPN10YHR200W YPL066WQ12194 479 aa12.96□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms