RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W SPC2Q04969 178 aa2.37□□□□□ -2.03
SNX41YDR425W SSK1Q07084 712 aa2.37□□□□□ -2.03
SNX41YDR425W TCO89Q08921 799 aa2.37□□□□□ -2.03
SNX41YDR425W YOR342CQ12182 319 aa2.37□□□□□ -2.03
SNX41YDR425W APC2Q12440 853 aa2.37□□□□□ -2.03
SNX41YDR425W SPE4Q12455 300 aa2.37□□□□□ -2.03
SNX41YDR425W TY1B-NL2Q99337 1749 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W RHO1P06780 209 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W GPA2P10823 449 aa2.36□□□□□ -2.03
SNX41YDR425W NMT1P14743 455 aa2.36□□□□□ -2.03
SNX41YDR425W CKA2P19454 339 aa2.36□□□□□ -2.03
SNX41YDR425W VMA16P23968 213 aa2.36□□□□□ -2.03
SNX41YDR425W PRR1P28708 518 aa2.36□□□□□ -2.03
SNX41YDR425W MEI4P29467 408 aa2.36□□□□□ -2.03
SNX41YDR425W DBF4P32325 704 aa2.36□□□□□ -2.03
SNX41YDR425W SPR1P32603 445 aa2.36□□□□□ -2.03
SNX41YDR425W CLG1P35190 452 aa2.36□□□□□ -2.03
SNX41YDR425W AGP2P38090 596 aa2.36□□□□□ -2.03
SNX41YDR425W GOS1P38736 223 aa2.36□□□□□ -2.03
SNX41YDR425W UTP9P38882 575 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W SER33P40510 469 aa2.36□□□□□ -2.03
SNX41YDR425W PAC11P40960 533 aa2.36□□□□□ -2.03
SNX41YDR425W SNX4P47057 423 aa2.36□□□□□ -2.03
SNX41YDR425W LYS4P49367 693 aaPredicted RBP2.36□□□□□ -2.03
SNX41YDR425W DIE2P50076 525 aa2.36□□□□□ -2.03
SNX41YDR425W RBG2P53295 368 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W CWC25P53854 179 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W KTR5P53966 522 aaPredicted RBP2.36□□□□□ -2.03
SNX41YDR425W SAM50P53969 484 aa2.36□□□□□ -2.03
SNX41YDR425W RHO4Q00246 291 aa2.36□□□□□ -2.03
SNX41YDR425W RNY1Q02933 434 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W MSC1Q03104 513 aa2.36□□□□□ -2.03
SNX41YDR425W YMR160WQ03823 816 aa2.36□□□□□ -2.03
SNX41YDR425W URC2Q04411 772 aa2.36□□□□□ -2.03
SNX41YDR425W COX20Q04935 205 aa2.36□□□□□ -2.03
SNX41YDR425W YMR226CQ05016 267 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W ERP1Q05359 219 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W GLO2Q05584 274 aa2.36□□□□□ -2.03
SNX41YDR425W FAR10Q06001 478 aa2.36□□□□□ -2.03
SNX41YDR425W YDL057WQ07379 328 aa2.36□□□□□ -2.03
SNX41YDR425W SYO1Q07395 620 aa2.36□□□□□ -2.03
SNX41YDR425W FMP45Q07651 309 aa2.36□□□□□ -2.03
SNX41YDR425W GRC3Q07845 632 aa2.36□□□□□ -2.03
SNX41YDR425W ENT4Q07872 247 aa2.36□□□□□ -2.03
SNX41YDR425W PPT2Q12036 173 aa2.36□□□□□ -2.03
SNX41YDR425W RCN2Q12044 265 aa2.36□□□□□ -2.03
SNX41YDR425W THP3Q12049 470 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W ATP16Q12165 160 aa2.36□□□□□ -2.03
SNX41YDR425W PDH1Q12428 516 aaKnown RBP2.36□□□□□ -2.03
SNX41YDR425W CYB2P00175 591 aa2.35□□□□□ -2.03
SNX41YDR425W RPL15AP05748 204 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W RAD10P06838 210 aa2.35□□□□□ -2.03
SNX41YDR425W PET494P07390 489 aaPredicted RBP2.35□□□□□ -2.03
SNX41YDR425W CDC24P11433 854 aaPredicted RBP2.35□□□□□ -2.03
SNX41YDR425W MRP13P12686 339 aa2.35□□□□□ -2.03
SNX41YDR425W SEN2P16658 377 aa2.35□□□□□ -2.03
SNX41YDR425W CLB3P24870 427 aa2.35□□□□□ -2.03
SNX41YDR425W PUP3P25451 205 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W PEX3P28795 441 aa2.35□□□□□ -2.03
SNX41YDR425W CRM1P30822 1084 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W NUP2P32499 720 aa2.35□□□□□ -2.03
SNX41YDR425W SMI1P32566 505 aa2.35□□□□□ -2.03
SNX41YDR425W ECM15P35195 104 aa2.35□□□□□ -2.03
SNX41YDR425W UTP30P36144 274 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W RRP3P38712 501 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W MDM31P38880 579 aa2.35□□□□□ -2.03
SNX41YDR425W KRE9P39005 276 aa2.35□□□□□ -2.03
SNX41YDR425W HPM1P40481 377 aa2.35□□□□□ -2.03
SNX41YDR425W CHS6P40955 746 aa2.35□□□□□ -2.03
SNX41YDR425W GCD10P41814 478 aa2.35□□□□□ -2.03
SNX41YDR425W FAR3P46671 204 aa2.35□□□□□ -2.03
SNX41YDR425W YDL186WP48568 277 aa2.35□□□□□ -2.03
SNX41YDR425W NUP84P52891 726 aa2.35□□□□□ -2.03
SNX41YDR425W COS10P52924 374 aa2.35□□□□□ -2.03
SNX41YDR425W BSC5P53755 489 aa2.35□□□□□ -2.03
SNX41YDR425W BNI5P53890 448 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W RSM23Q01163 450 aa2.35□□□□□ -2.03
SNX41YDR425W CSM3Q04659 317 aa2.35□□□□□ -2.03
SNX41YDR425W SSQ1Q05931 657 aaPredicted RBP2.35□□□□□ -2.03
SNX41YDR425W DIC1Q06143 298 aa2.35□□□□□ -2.03
SNX41YDR425W YET3Q07451 203 aa2.35□□□□□ -2.03
SNX41YDR425W LOT6Q07923 191 aa2.35□□□□□ -2.03
SNX41YDR425W MED1Q12321 566 aa2.35□□□□□ -2.03
SNX41YDR425W RRP36Q12481 300 aaPredicted RBP2.35□□□□□ -2.03
SNX41YDR425W LSO2Q3E772 92 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W TEF1P02994 458 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W STF2P16965 84 aa2.35□□□□□ -2.03
SNX41YDR425W VPS3P23643 1011 aa2.35□□□□□ -2.03
SNX41YDR425W CTR86P25355 563 aa2.35□□□□□ -2.03
SNX41YDR425W RER1P25560 188 aa2.35□□□□□ -2.03
SNX41YDR425W CPR3P25719 182 aa2.35□□□□□ -2.03
SNX41YDR425W CYS4P32582 507 aaKnown RBP2.35□□□□□ -2.03
SNX41YDR425W VPS17P32913 551 aa2.35□□□□□ -2.03
SNX41YDR425W YKL100CP34248 587 aa2.35□□□□□ -2.03
SNX41YDR425W STB6P36085 766 aa2.35□□□□□ -2.03
SNX41YDR425W ROT2P38138 954 aa2.35□□□□□ -2.03
SNX41YDR425W MSR1P38714 643 aa2.35□□□□□ -2.03
SNX41YDR425W YRB2P40517 327 aa2.35□□□□□ -2.03
SNX41YDR425W MSS2P40990 351 aa2.35□□□□□ -2.03
SNX41YDR425W ROK1P45818 564 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms