RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	DIB1	Q06819	143 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	YET3	Q07451	203 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	FMP45	Q07651	309 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SMC5	Q08204	1093 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	THI20	Q08224	551 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SGT1	Q08446	395 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DDC1	Q08949	612 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	FMP40	Q08968	688 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	YPR202W	Q08993	238 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ATG29	Q12092	213 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	INP53	Q12271	1107 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ISA2	Q12425	185 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	AVL9	Q12500	764 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PAR32	Q12515	295 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	SEC39	Q12745	709 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MF(ALPHA)1	P01149	165 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	TEF1	P02994	458 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	RAD10	P06838	210 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DST1	P07273	309 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RPL3	P14126	387 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	ARF2	P19146	181 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	EXO70	P19658	623 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	TKL1	P23254	680 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	VMA16	P23968	213 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MNE1	P24720	663 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	CLB3	P24870	427 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RBK1	P25332	333 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	STE50	P25344	346 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ADH7	P25377	361 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	GID7	P25569	745 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YCR051W	P25631	222 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ERV1	P27882	189 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	IDH2	P28241	369 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	NTG1	P31378	399 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DPH5	P32469	300 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	MRE11	P32829	692 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	CYM1	P32898	989 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MDL1	P33310	695 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.77	□□□□□ -2.29	not detected
SEC1	YDR164C	SDH3	P33421	198 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SOF1	P33750	489 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	SEF1	P34228	1148 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	CSG2	P35206	410 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YNK1	P36010	153 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	SNU114	P36048	1008 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	MCR1	P36060	302 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	CMC1	P36064	111 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ETR1	P38071	380 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DUG2	P38149	878 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RFT1	P38206	574 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	ARP1	P38696	384 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	EFM1	P38732	585 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	OTU2	P38747	307 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	ELO1	P39540	310 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	UIP3	P39547	235 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PEP8	P40335	379 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ATM1	P40416	690 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SEC28	P40509	296 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	PKP1	P40530	394 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	SSU1	P41930	458 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	HXT14	P42833	540 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ZIM17	P42844	174 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DLD2	P46681	530 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	GUF1	P46943	645 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DPB11	P47027	764 aa	Predicted RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	DIA3	P52290	468 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ALT2	P52892	507 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	VID30	P53076	958 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MRM2	P53123	320 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	ART5	P53244	586 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	TWF1	P53250	332 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YGR111W	P53265	400 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YGR117C	P53270	476 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	IPI3	P53877	555 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YNL146W	P53906	100 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	CIK1	Q01649	594 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	OAZ1	Q02803	292 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MET31	Q03081	177 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MSC1	Q03104	513 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	MMT1	Q03218	510 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YDR239C	Q03780	787 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	FIN1	Q03898	291 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PPM1	Q04081	328 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	HPT1	Q04178	221 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	DPB4	Q04603	196 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	IVY1	Q04934	453 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	COQ9	Q05779	260 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	RIF2	Q06208	395 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	BCP1	Q06338	283 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DTD1	Q07648	150 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	YEH2	Q07950	538 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	IES4	Q08561	116 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PGC1	Q08959	321 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	DAS2	Q12084	232 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	YDR018C	Q12185	396 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	HIF1	Q12373	385 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	PDH1	Q12428	516 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	AFI1	Q99222	893 aa		0.77	□□□□□ -2.29
SEC1	YDR164C	CHC1	P22137	1653 aa	Known RBP	0.77	□□□□□ -2.29
SEC1	YDR164C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms