RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C PML39Q03760 334 aa6.8□□□□□ -1.32
CDC13YDL220C PHO92Q06390 306 aa6.8□□□□□ -1.32
CDC13YDL220C YLR422WQ06409 1932 aa6.8□□□□□ -1.32
CDC13YDL220C AI1P03875 834 aa6.8□□□□□ -1.32
CDC13YDL220C MSS18P08593 268 aa6.8□□□□□ -1.32
CDC13YDL220C FAA1P30624 700 aaKnown RBP6.8□□□□□ -1.32
CDC13YDL220C LIP5P32875 414 aa6.8□□□□□ -1.32
CDC13YDL220C FET3P38993 636 aa6.8□□□□□ -1.32
CDC13YDL220C MND2P40577 368 aa6.8□□□□□ -1.32
CDC13YDL220C YNR065CP53751 1116 aa6.8□□□□□ -1.32
CDC13YDL220C NUP49Q02199 472 aa6.8□□□□□ -1.32
CDC13YDL220C YRR1Q12172 810 aa6.8□□□□□ -1.32
CDC13YDL220C YLR108CQ12259 485 aa6.8□□□□□ -1.32
CDC13YDL220C PCD1Q12524 340 aa6.8□□□□□ -1.32
CDC13YDL220C RIB3Q99258 208 aa6.8□□□□□ -1.32
CDC13YDL220C PRC1P00729 532 aa6.8□□□□□ -1.32
CDC13YDL220C SSA3P09435 649 aaKnown RBP6.8□□□□□ -1.32
CDC13YDL220C UTR1P21373 530 aa6.8□□□□□ -1.32
CDC13YDL220C MRPL15P36523 253 aa6.8□□□□□ -1.32
CDC13YDL220C MMF1P40185 145 aaKnown RBP6.8□□□□□ -1.32
CDC13YDL220C AIM22P47051 409 aa6.8□□□□□ -1.32
CDC13YDL220C YML6P51998 286 aa6.8□□□□□ -1.32
CDC13YDL220C ISR1Q06098 443 aaKnown RBP6.8□□□□□ -1.32
CDC13YDL220C YGK3Q12222 375 aaPredicted RBP6.8□□□□□ -1.32
CDC13YDL220C RPL4AP10664 362 aaKnown RBP6.79□□□□□ -1.32
CDC13YDL220C PEX34P25584 144 aa6.79□□□□□ -1.32
CDC13YDL220C AHC2P25649 128 aa6.79□□□□□ -1.32
CDC13YDL220C ADE1P27616 306 aa6.79□□□□□ -1.32
CDC13YDL220C LAC1P28496 418 aa6.79□□□□□ -1.32
CDC13YDL220C GUT1P32190 709 aa6.79□□□□□ -1.32
CDC13YDL220C NRP1P32770 719 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
CDC13YDL220C SHP1P34223 423 aa6.79□□□□□ -1.32
CDC13YDL220C PRS3P38689 320 aaKnown RBP6.79□□□□□ -1.32
CDC13YDL220C SCC4P40090 624 aa6.79□□□□□ -1.32
CDC13YDL220C PTR3P43606 678 aa6.79□□□□□ -1.32
CDC13YDL220C ALY2P47029 1046 aa6.79□□□□□ -1.32
CDC13YDL220C MPS3P47069 682 aa6.79□□□□□ -1.32
CDC13YDL220C ARH1P48360 493 aa6.79□□□□□ -1.32
CDC13YDL220C RPL4BP49626 362 aaKnown RBP6.79□□□□□ -1.32
CDC13YDL220C NAM8Q00539 523 aaKnown RBP6.79□□□□□ -1.32
CDC13YDL220C UBP16Q02863 499 aa6.79□□□□□ -1.32
CDC13YDL220C HSP31Q04432 237 aa6.79□□□□□ -1.32
CDC13YDL220C NEJ1Q06148 342 aa6.79□□□□□ -1.32
CDC13YDL220C NGR1P32831 672 aaKnown RBP6.79□□□□□ -1.32
CDC13YDL220C PIN4P34217 668 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
CDC13YDL220C BIT2P38346 545 aa6.79□□□□□ -1.32
CDC13YDL220C IKI1P38874 309 aa6.79□□□□□ -1.32
CDC13YDL220C MNL1P38888 796 aa6.79□□□□□ -1.32
CDC13YDL220C PCL6P40038 420 aa6.79□□□□□ -1.32
CDC13YDL220C LOH1P47055 219 aa6.79□□□□□ -1.32
CDC13YDL220C YJR107WP47145 328 aa6.79□□□□□ -1.32
CDC13YDL220C MRX6P48564 524 aa6.79□□□□□ -1.32
CDC13YDL220C RPT4P53549 437 aaKnown RBP6.79□□□□□ -1.32
CDC13YDL220C YLR179CQ06252 201 aaKnown RBP6.79□□□□□ -1.32
CDC13YDL220C SSK1Q07084 712 aa6.79□□□□□ -1.32
CDC13YDL220C REV1P12689 985 aa6.78□□□□□ -1.32
CDC13YDL220C GAP1P19145 602 aaPredicted RBP6.78□□□□□ -1.32
CDC13YDL220C CKS1P20486 150 aaKnown RBP6.78□□□□□ -1.32
CDC13YDL220C GCD11P32481 527 aaKnown RBP6.78□□□□□ -1.32
CDC13YDL220C TCA17P32613 152 aa6.78□□□□□ -1.32
CDC13YDL220C YKR051WP36142 418 aa6.78□□□□□ -1.32
CDC13YDL220C AVT5P38176 459 aa6.78□□□□□ -1.32
CDC13YDL220C SOP4P39543 234 aaPredicted RBP6.78□□□□□ -1.32
CDC13YDL220C SLS1P42900 643 aa6.78□□□□□ -1.32
CDC13YDL220C PKP2P53170 491 aa6.78□□□□□ -1.32
CDC13YDL220C REG1Q00816 1014 aa6.78□□□□□ -1.32
CDC13YDL220C RPA49Q01080 415 aaPredicted RBP6.78□□□□□ -1.32
CDC13YDL220C SNO1Q03144 224 aa6.78□□□□□ -1.32
CDC13YDL220C GAS2Q06135 555 aa6.78□□□□□ -1.32
CDC13YDL220C YPR147CQ06522 304 aaKnown RBP6.78□□□□□ -1.32
CDC13YDL220C IZH3Q07959 543 aa6.78□□□□□ -1.32
CDC13YDL220C YPL199CQ08954 240 aa6.78□□□□□ -1.32
CDC13YDL220C TGS1Q12052 315 aa6.78□□□□□ -1.32
CDC13YDL220C DST1P07273 309 aa6.78□□□□□ -1.32
CDC13YDL220C ERR1P0CX10 437 aa6.78□□□□□ -1.32
CDC13YDL220C ERR2P0CX11 437 aa6.78□□□□□ -1.32
CDC13YDL220C FUN14P18411 198 aa6.78□□□□□ -1.32
CDC13YDL220C CDC50P25656 391 aa6.78□□□□□ -1.32
CDC13YDL220C ERR3P42222 437 aa6.78□□□□□ -1.32
CDC13YDL220C CUS2P53830 285 aaPredicted RBP6.78□□□□□ -1.32
CDC13YDL220C PPN1Q04119 674 aa6.78□□□□□ -1.32
CDC13YDL220C YDL199CQ12407 687 aa6.78□□□□□ -1.32
CDC13YDL220C RGS2Q99188 309 aa6.78□□□□□ -1.32
CDC13YDL220C AFI1Q99222 893 aa6.78□□□□□ -1.32
CDC13YDL220C FKS3Q04952 1785 aa6.78□□□□□ -1.32
CDC13YDL220C ADH2P00331 348 aaKnown RBP6.77□□□□□ -1.33
CDC13YDL220C DCC1P25559 380 aa6.77□□□□□ -1.33
CDC13YDL220C URA7P28274 579 aaKnown RBP6.77□□□□□ -1.33
CDC13YDL220C CYC2P38909 366 aa6.77□□□□□ -1.33
CDC13YDL220C XDJ1P39102 459 aa6.77□□□□□ -1.33
CDC13YDL220C HIS6P40545 261 aa6.77□□□□□ -1.33
CDC13YDL220C CAK1P43568 368 aaPredicted RBP6.77□□□□□ -1.33
CDC13YDL220C SHY1P53266 389 aa6.77□□□□□ -1.33
CDC13YDL220C YNL095CP53932 642 aa6.77□□□□□ -1.33
CDC13YDL220C KTR6P54070 446 aa6.77□□□□□ -1.33
CDC13YDL220C ATG20Q07528 640 aa6.77□□□□□ -1.33
CDC13YDL220C YPL272CQ08984 517 aa6.77□□□□□ -1.33
CDC13YDL220C RAD28Q12021 506 aa6.77□□□□□ -1.33
CDC13YDL220C YLR126CQ12288 251 aa6.77□□□□□ -1.33
CDC13YDL220C YOR019WQ99248 730 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms