RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	VPS33	P20795	691 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	GPI12	P23797	304 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	PHO3	P24031	467 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	CWH43	P25618	953 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	EMP70	P32802	667 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	OAF3	P36023	863 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	YHI9	P38765	294 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	IES5	P40060	125 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	MAD2	P40958	196 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	CAK1	P43568	368 aa	Predicted RBP	3.9	□□□□□ -1.79
RPN6	YDL097C	ABM1	P47146	123 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	SBH2	P52871	88 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	ZIP2	P53061	704 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	SDC1	Q03323	175 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	SSY1	Q03770	852 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	MLC2	Q06580	163 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	RAF1	Q06891	181 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	HOS1	Q12214	470 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	RDL1	Q12305	139 aa	Known RBP	3.9	□□□□□ -1.79
RPN6	YDL097C	RMD5	Q12508	421 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	RPS21B	Q3E754	87 aa	Known RBP	3.9	□□□□□ -1.79
RPN6	YDL097C	SRN2	Q99176	213 aa		3.9	□□□□□ -1.79
RPN6	YDL097C	HEM2	P05373	342 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	YBR220C	P38318	560 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	NCA3	P46955	337 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	ALB1	P47019	175 aa	Predicted RBP	3.89	□□□□□ -1.79
RPN6	YDL097C	MSY1	P48527	492 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	NGL3	Q03210	505 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	RIM9	Q04734	239 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	SEI1	Q06058	285 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	YLL007C	Q07799	665 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	YGR035W-A	Q45U48	73 aa		3.89	□□□□□ -1.79
RPN6	YDL097C	CAR2	P07991	424 aa	Known RBP	3.88	□□□□□ -1.79
RPN6	YDL097C	ERG20	P08524	352 aa	Known RBP	3.88	□□□□□ -1.79
RPN6	YDL097C	RSR1	P13856	272 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	GUK1	P15454	187 aa	Known RBP	3.88	□□□□□ -1.79
RPN6	YDL097C	SEC65	P29478	273 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	DBF4	P32325	704 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	RPT5	P33297	434 aa	Known RBP	3.88	□□□□□ -1.79
RPN6	YDL097C	PEX5	P35056	612 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	YET1	P35723	206 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	JNM1	P36224	373 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	REE1	P40893	198 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	FKH2	P41813	862 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	PET130	P47065	347 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	YDL186W	P48568	277 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	KEL2	P50090	882 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	ATP22	P50273	684 aa	Predicted RBP	3.88	□□□□□ -1.79
RPN6	YDL097C	MRK1	P50873	501 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	COX18	P53239	316 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	BOP3	P53958	396 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	YLR460C	P54007	376 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	ACS1	Q01574	713 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	YPL107W	Q02873	248 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	PRM15	Q03262	622 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	RTR2	Q12378	196 aa		3.88	□□□□□ -1.79
RPN6	YDL097C	NOP58	Q12499	511 aa	Known RBP	3.88	□□□□□ -1.79
RPN6	YDL097C	RPL20A	P0CX23	172 aa	Known RBP	3.87	□□□□□ -1.79
RPN6	YDL097C	RPL20B	P0CX24	172 aa	Predicted RBP	3.87	□□□□□ -1.79
RPN6	YDL097C	RPO26	P20435	155 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	SPS22	P25380	463 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	ITR2	P30606	609 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	PTH2	P34222	208 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	FAT1	P38225	669 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	FAA2	P39518	744 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	MEP1	P40260	492 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	ARG2	P40360	574 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	YIL029C	P40538	142 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	HIS6	P40545	261 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	APS3	P47064	194 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	BRO1	P48582	844 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	ERG5	P54781	538 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	CIK1	Q01649	594 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	YMR111C	Q04461	462 aa	Predicted RBP	3.87	□□□□□ -1.79
RPN6	YDL097C	YMR310C	Q04867	317 aa	Predicted RBP	3.87	□□□□□ -1.79
RPN6	YDL097C	RIF2	Q06208	395 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	RRG7	Q08774	242 aa	Predicted RBP	3.87	□□□□□ -1.79
RPN6	YDL097C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
RPN6	YDL097C	NUS1	Q12063	375 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	YPR011C	Q12251	326 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	NKP1	Q12493	238 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	SKS1	Q12505	502 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	TAD3	Q9URQ3	322 aa		3.87	□□□□□ -1.79
RPN6	YDL097C	ARF1	P11076	181 aa	Known RBP	3.86	□□□□□ -1.79
RPN6	YDL097C	PEP5	P12868	1029 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	AIM17	P23180	465 aa	Known RBP	3.86	□□□□□ -1.79
RPN6	YDL097C	IDH2	P28241	369 aa	Known RBP	3.86	□□□□□ -1.79
RPN6	YDL097C	KES1	P35844	434 aa	Known RBP	3.86	□□□□□ -1.79
RPN6	YDL097C	RPC37	P36121	282 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	ADE17	P38009	592 aa	Known RBP	3.86	□□□□□ -1.79
RPN6	YDL097C	MEF2	P39677	819 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	YIL067C	P40514	678 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	AGE2	P40529	298 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	YFL064C	P43540	174 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	TEL2	P53038	688 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	CWC22	P53333	577 aa	Known RBP	3.86	□□□□□ -1.79
RPN6	YDL097C	YNL260C	P53846	198 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	REC102	Q02721	264 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	DCR2	Q05924	578 aa		3.86	□□□□□ -1.79
RPN6	YDL097C	YEH1	Q07804	573 aa		3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms