RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ARO10Q06408 635 aa6.54□□□□□ -1.36
TDP1YBR223C SCM3Q12334 223 aa6.54□□□□□ -1.36
TDP1YBR223C PET122P10355 254 aa6.54□□□□□ -1.36
TDP1YBR223C ZWF1P11412 505 aaKnown RBP6.54□□□□□ -1.36
TDP1YBR223C CAP2P13517 287 aa6.54□□□□□ -1.36
TDP1YBR223C DBF2P22204 572 aa6.54□□□□□ -1.36
TDP1YBR223C ARE1P25628 610 aa6.54□□□□□ -1.36
TDP1YBR223C ACH1P32316 526 aa6.54□□□□□ -1.36
TDP1YBR223C OAC1P32332 324 aa6.54□□□□□ -1.36
TDP1YBR223C MKK1P32490 508 aa6.54□□□□□ -1.36
TDP1YBR223C PET309P32522 965 aaPredicted RBP6.54□□□□□ -1.36
TDP1YBR223C DHR2P36009 735 aaPredicted RBP6.54□□□□□ -1.36
TDP1YBR223C APT2P36973 181 aa6.54□□□□□ -1.36
TDP1YBR223C SCO2P38072 301 aa6.54□□□□□ -1.36
TDP1YBR223C BAP2P38084 609 aa6.54□□□□□ -1.36
TDP1YBR223C MED6P38782 295 aa6.54□□□□□ -1.36
TDP1YBR223C GDH3P39708 457 aa6.54□□□□□ -1.36
TDP1YBR223C BUR6P40096 142 aa6.54□□□□□ -1.36
TDP1YBR223C MOB1P40484 314 aa6.54□□□□□ -1.36
TDP1YBR223C LYS12P40495 371 aaKnown RBP6.54□□□□□ -1.36
TDP1YBR223C ROG1P53118 685 aa6.54□□□□□ -1.36
TDP1YBR223C SGF73P53165 657 aa6.54□□□□□ -1.36
TDP1YBR223C TPS1Q00764 495 aaKnown RBP6.54□□□□□ -1.36
TDP1YBR223C YLR446WQ06204 433 aa6.54□□□□□ -1.36
TDP1YBR223C OPT2Q06593 877 aa6.54□□□□□ -1.36
TDP1YBR223C ATG10Q07879 167 aa6.54□□□□□ -1.36
TDP1YBR223C PEX27Q08580 376 aa6.54□□□□□ -1.36
TDP1YBR223C RPS17AP02407 136 aaKnown RBP6.53□□□□□ -1.36
TDP1YBR223C ADE5,7P07244 802 aaKnown RBP6.53□□□□□ -1.36
TDP1YBR223C KIN2P13186 1147 aaKnown RBP6.53□□□□□ -1.36
TDP1YBR223C RPS17BP14127 136 aaKnown RBP6.53□□□□□ -1.36
TDP1YBR223C CHA1P25379 360 aaKnown RBP6.53□□□□□ -1.36
TDP1YBR223C COQ8P27697 501 aa6.53□□□□□ -1.36
TDP1YBR223C LYP1P32487 611 aa6.53□□□□□ -1.36
TDP1YBR223C KKQ8P36004 724 aa6.53□□□□□ -1.36
TDP1YBR223C RRN10P38204 145 aa6.53□□□□□ -1.36
TDP1YBR223C TAE1P38340 232 aa6.53□□□□□ -1.36
TDP1YBR223C AXL2P38928 823 aa6.53□□□□□ -1.36
TDP1YBR223C RCY1P39531 840 aa6.53□□□□□ -1.36
TDP1YBR223C FAU1P40099 211 aa6.53□□□□□ -1.36
TDP1YBR223C MAD2P40958 196 aa6.53□□□□□ -1.36
TDP1YBR223C YFR020WP43600 232 aa6.53□□□□□ -1.36
TDP1YBR223C RIM21P48565 533 aa6.53□□□□□ -1.36
TDP1YBR223C DIE2P50076 525 aa6.53□□□□□ -1.36
TDP1YBR223C NBP35P52920 328 aa6.53□□□□□ -1.36
TDP1YBR223C YGR079WP53249 370 aa6.53□□□□□ -1.36
TDP1YBR223C YSA1Q01976 231 aa6.53□□□□□ -1.36
TDP1YBR223C YMR087WQ04299 284 aa6.53□□□□□ -1.36
TDP1YBR223C PDR8Q06149 701 aa6.53□□□□□ -1.36
TDP1YBR223C HSP42Q12329 375 aa6.53□□□□□ -1.36
TDP1YBR223C PHO4P07270 312 aaKnown RBP6.52□□□□□ -1.37
TDP1YBR223C MET2P08465 486 aa6.52□□□□□ -1.37
TDP1YBR223C CHL1P22516 861 aaPredicted RBP6.52□□□□□ -1.37
TDP1YBR223C ASF2P32448 525 aaPredicted RBP6.52□□□□□ -1.37
TDP1YBR223C NDC1P32500 655 aa6.52□□□□□ -1.37
TDP1YBR223C MNN2P38069 597 aa6.52□□□□□ -1.37
TDP1YBR223C YHR035WP38769 630 aa6.52□□□□□ -1.37
TDP1YBR223C NVJ1P38881 321 aa6.52□□□□□ -1.37
TDP1YBR223C TAT2P38967 592 aa6.52□□□□□ -1.37
TDP1YBR223C CCT6P39079 546 aa6.52□□□□□ -1.37
TDP1YBR223C AIM2P39721 246 aa6.52□□□□□ -1.37
TDP1YBR223C BOL3P39724 118 aa6.52□□□□□ -1.37
TDP1YBR223C ZRG8P40021 1076 aa6.52□□□□□ -1.37
TDP1YBR223C MET28P40573 187 aa6.52□□□□□ -1.37
TDP1YBR223C SCW11P53189 542 aa6.52□□□□□ -1.37
TDP1YBR223C IMP4P53941 290 aaKnown RBP6.52□□□□□ -1.37
TDP1YBR223C MRPL13Q02204 264 aa6.52□□□□□ -1.37
TDP1YBR223C MSC1Q03104 513 aa6.52□□□□□ -1.37
TDP1YBR223C PLP1Q04004 230 aa6.52□□□□□ -1.37
TDP1YBR223C REX4Q08237 289 aa6.52□□□□□ -1.37
TDP1YBR223C YPL066WQ12194 479 aa6.52□□□□□ -1.37
TDP1YBR223C SUL2Q12325 893 aa6.52□□□□□ -1.37
TDP1YBR223C PDH1Q12428 516 aaKnown RBP6.52□□□□□ -1.37
TDP1YBR223C GPM1P00950 247 aaKnown RBP6.51□□□□□ -1.37
TDP1YBR223C PDE2P06776 526 aa6.51□□□□□ -1.37
TDP1YBR223C STE7P06784 515 aa6.51□□□□□ -1.37
TDP1YBR223C SPT14P32363 452 aa6.51□□□□□ -1.37
TDP1YBR223C YPT7P32939 208 aa6.51□□□□□ -1.37
TDP1YBR223C DMA1P38823 416 aa6.51□□□□□ -1.37
TDP1YBR223C PSA1P41940 361 aaKnown RBP6.51□□□□□ -1.37
TDP1YBR223C PRM10P42946 383 aa6.51□□□□□ -1.37
TDP1YBR223C LSG1P53145 640 aaKnown RBP6.51□□□□□ -1.37
TDP1YBR223C MPC1P53157 130 aaKnown RBP6.51□□□□□ -1.37
TDP1YBR223C BUD17P53727 317 aa6.51□□□□□ -1.37
TDP1YBR223C BIO5P53744 561 aaKnown RBP6.51□□□□□ -1.37
TDP1YBR223C ABZ2Q03266 374 aa6.51□□□□□ -1.37
TDP1YBR223C YDR514CQ04408 483 aa6.51□□□□□ -1.37
TDP1YBR223C RNH202Q05635 350 aa6.51□□□□□ -1.37
TDP1YBR223C COA4Q05809 96 aa6.51□□□□□ -1.37
TDP1YBR223C YPR196WQ06595 470 aa6.51□□□□□ -1.37
TDP1YBR223C YPR064WQ12492 139 aa6.51□□□□□ -1.37
TDP1YBR223C SUS1Q6WNK7 96 aa6.51□□□□□ -1.37
TDP1YBR223C RAM1P22007 431 aa6.5□□□□□ -1.37
TDP1YBR223C KAP122P32767 1081 aa6.5□□□□□ -1.37
TDP1YBR223C ZRT3P34240 503 aa6.5□□□□□ -1.37
TDP1YBR223C TUL1P36096 758 aa6.5□□□□□ -1.37
TDP1YBR223C MET30P39014 640 aa6.5□□□□□ -1.37
TDP1YBR223C MBP1P39678 833 aa6.5□□□□□ -1.37
TDP1YBR223C PTC2P39966 464 aaKnown RBP6.5□□□□□ -1.37
TDP1YBR223C OSW5P40219 148 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms