RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CLMNQ96JQ2 1002 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 CEP63Q96MT8 703 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 LXNQ9BS40 222 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 PPME1Q9Y570 386 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.79□□□□□ -0.68
PHGDH-215ENST00000641371 A0A1W2PQC6 194 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 SPATA31C2B4DYI2 1134 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 KCNJ18B7U540 433 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 DHX15O43143 795 aaKnown RBP10.78□□□□□ -0.68
PHGDH-215ENST00000641371 CHMP2AO43633 222 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 PSAPP07602 524 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 EDNRBP24530 442 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 DNM2P50570 870 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 ALDH5A1P51649 535 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-215ENST00000641371 STX17P56962 302 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 FKBP3Q00688 224 aaKnown RBP10.78□□□□□ -0.68
PHGDH-215ENST00000641371 CYP4A11Q02928 519 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 PPP2R3AQ06190 1150 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 STK4Q13043 487 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 MOGSQ13724 837 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 GIT2Q14161 759 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 KCNJ12Q14500 433 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 NEDD9Q14511 834 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 KCTD2Q14681 263 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 BMT2Q1RMZ1 405 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 RINT1Q6NUQ1 792 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 TMC6Q7Z403 805 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 ABRAQ8N0Z2 381 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 IL31RAQ8NI17 732 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 GOLGA5Q8TBA6 731 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 CCDC51Q96ER9 411 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
PHGDH-215ENST00000641371 MOV10L1Q9BXT6 1211 aaKnown RBP10.78□□□□□ -0.68
PHGDH-215ENST00000641371 BHMT2Q9H2M3 363 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 C17orf75Q9HAS0 396 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 PARVGQ9HBI0 331 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
PHGDH-215ENST00000641371 SAMSN1Q9NSI8 373 aaKnown RBP10.78□□□□□ -0.68
PHGDH-215ENST00000641371 BTBD7Q9P203 1132 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 CGNQ9P2M7 1197 aaKnown RBP10.78□□□□□ -0.68
PHGDH-215ENST00000641371 SAMM50Q9Y512 469 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
PHGDH-215ENST00000641371 MYH11P35749 1972 aa10.77□□□□□ -0.68
PHGDH-215ENST00000641371 ASB14A6NK59 587 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 N4BP3O15049 544 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 STRNO43815 780 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 CALUO43852 315 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 FCER1AP12319 257 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 KCNA2P16389 499 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 ERCC3P19447 782 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 RPL13P26373 211 aaKnown RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 ZNF131P52739 623 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 COPB1P53618 953 aaKnown RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 SNRPFP62306 86 aaKnown RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 ERVK-9P63128 1117 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 ERVK-24P63145 666 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 ITGB3BPQ13352 177 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 CTTNQ14247 550 aaKnown RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 HSP90AA2PQ14568 343 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 NFIL3Q16649 462 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 MAP1SQ66K74 1059 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 GPAT2Q6NUI2 795 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 MIS18BP1Q6P0N0 1132 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 C1orf186Q6ZWK4 172 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 FILIP1Q7Z7B0 1213 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 PPFIBP1Q86W92 1011 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 LRRC8AQ8IWT6 810 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 FAM133AQ8N9E0 248 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 RETREG2Q8NC44 543 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 ZNF784Q8NCA9 323 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 GPRC5AQ8NFJ5 357 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 SMCR8Q8TEV9 937 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 GJA10Q969M2 543 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 DRC1Q96MC2 740 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 MED15Q96RN5 788 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 MMP19Q99542 508 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 PAGR1Q9BTK6 254 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 NUP58Q9BVL2 599 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 NAA15Q9BXJ9 866 aaKnown RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 SRRTQ9BXP5 876 aaKnown RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 JPH1Q9HDC5 661 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 SLC39A2Q9NP94 309 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 RGL1Q9NZL6 768 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 LARSQ9P2J5 1176 aaKnown RBP10.77□□□□□ -0.69
PHGDH-215ENST00000641371 MORF4L1Q9UBU8 362 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 SLC9A2Q9UBY0 812 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 PCDHB13Q9Y5F0 798 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 LCTP09848 1927 aa10.77□□□□□ -0.69
PHGDH-215ENST00000641371 WDR81Q562E7 1941 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 MYH9P35579 1960 aaKnown RBP10.76□□□□□ -0.69
PHGDH-215ENST00000641371 LGALS16A8MUM7 142 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 H0YCG3 227 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 PDXKO00764 312 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 CNMDO75829 334 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 TUBB4AP04350 444 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 PTGS1P23219 599 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 IRF5Q13568 498 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 MYBPC2Q14324 1141 aa10.76□□□□□ -0.69
PHGDH-215ENST00000641371 KRT31Q15323 416 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms