RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 MAP7Q14244 749 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 RTN1Q16799 776 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 EARS2Q5JPH6 523 aaKnown RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 SPECC1Q5M775 1068 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 TMCO4Q5TGY1 634 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 NR1H4Q96RI1 486 aaPredicted RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 ZSCAN10Q96SZ4 725 aaPredicted RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 SCAND2PQ9GZW5 306 aaPredicted RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 CCDC68Q9H2F9 335 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 CPVLQ9H3G5 476 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 VCX3AQ9NNX9 186 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 DDX19AQ9NUU7 478 aaKnown RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 DKK3Q9UBP4 350 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.02
RTTN-223ENST00000640931 LEMD3Q9Y2U8 911 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 UTRNP46939 3433 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 CHD4Q14839 1912 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 MROH7-TTC4A0A0A0MT08 1334 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 TMEM110-MUSTN1A8MSY1 372 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 TTI1O43156 1089 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 SART1O43290 800 aaKnown RBP8.7□□□□□ -1.02
RTTN-223ENST00000640931 PFDN1O60925 122 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 LIFRP42702 1097 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 BTDP43251 543 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 BAG6P46379 1132 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 APLP1P51693 650 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 GRIN1Q05586 938 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 SSRP1Q08945 709 aaKnown RBP8.7□□□□□ -1.02
RTTN-223ENST00000640931 WDR93Q6P2C0 686 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 C6orf89Q6UWU4 347 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 ERICH1Q86X53 443 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 CERS5Q8N5B7 392 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 FSIP1Q8NA03 581 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 GABPB2Q8TAK5 448 aaPredicted RBP8.7□□□□□ -1.02
RTTN-223ENST00000640931 SNX27Q96L92 541 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 NDNQ99608 321 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 UBAC1Q9BSL1 405 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 BRIP1Q9BX63 1249 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 RTFDC1Q9BY42 306 aaPredicted RBP8.7□□□□□ -1.02
RTTN-223ENST00000640931 EIF2AQ9BY44 585 aaKnown RBP8.7□□□□□ -1.02
RTTN-223ENST00000640931 CRNKL1Q9BZJ0 848 aaKnown RBP8.7□□□□□ -1.02
RTTN-223ENST00000640931 TNMDQ9H2S6 317 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 VPS54Q9P1Q0 977 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 ZMAT5Q9UDW3 170 aaKnown RBP8.7□□□□□ -1.02
RTTN-223ENST00000640931 PRELID1Q9Y255 219 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 CARD8Q9Y2G2 431 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 DUOX1Q9NRD9 1551 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 ANKRD31Q8N7Z5 1873 aa8.7□□□□□ -1.02
RTTN-223ENST00000640931 DPPA5A6NC42 116 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 TRIM64CA6NLI5 447 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 GOLGA8KD6RF30 607 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 BOLA2-SMG1P6H3BVE0 249 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 SEMA3EO15041 775 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 ENPP1P22413 925 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 BDNFP23560 247 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 SCNN1DP51172 638 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 CCNG1P51959 295 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 NDUFA8P51970 172 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 SULT2A1Q06520 285 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 DMPKQ09013 629 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 ARHGEF6Q15052 776 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 CMPK2Q5EBM0 449 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 CFAP157Q5JU67 520 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 MFSD14BQ5SR56 506 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 ZNF804AQ7Z570 1209 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 CRACR2BQ8N4Y2 399 aaPredicted RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 FANCBQ8NB91 859 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 LINC00301Q8NCQ3 95 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 ESR2Q92731 530 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 DDX27Q96GQ7 796 aaKnown RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 L3MBTL3Q96JM7 780 aaPredicted RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 SMC6Q96SB8 1091 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 RSPH9Q9H1X1 276 aaPredicted RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 CLSTN2Q9H4D0 955 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 CNNM2Q9H8M5 875 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 IL17RBQ9NRM6 502 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 C6orf203Q9P0P8 240 aaPredicted RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 HESX1Q9UBX0 185 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 HPCAL4Q9UM19 191 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 TBKBP1A7MCY6 615 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 WDR46O15213 610 aaKnown RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 BIRC5O15392 142 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 ZNF202O95125 648 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 SSBP05455 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
RTTN-223ENST00000640931 SRGNP10124 158 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 ATP2B4P23634 1241 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 MATR3P43243 847 aaKnown RBP eCLIP8.69□□□□□ -1.02
RTTN-223ENST00000640931 TOB1P50616 345 aaPredicted RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 BPIFB4P59827 614 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 KIF5AQ12840 1032 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 SLC35G1Q2M3R5 365 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 LACTB2Q53H82 288 aaPredicted RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 IFIT1BQ5T764 474 aaKnown RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 TMEM53Q6P2H8 277 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 C11orf57Q6ZUT1 292 aaPredicted RBP8.69□□□□□ -1.02
RTTN-223ENST00000640931 CLEC10AQ8IUN9 316 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 ATP6V0A1Q93050 837 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 MPP4Q96JB8 637 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 PNKPQ96T60 521 aa8.69□□□□□ -1.02
RTTN-223ENST00000640931 TANGO6Q9C0B7 1094 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms