RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 HAUS4Q9H6D7 363 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 RAVER2Q9HCJ3 691 aaKnown RBP9.18□□□□□ -0.94
PNKP-231ENST00000640501 JADE2Q9NQC1 790 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 ADARB2Q9NS39 739 aaKnown RBP9.18□□□□□ -0.94
PNKP-231ENST00000640501 TYW1Q9NV66 732 aaKnown RBP9.18□□□□□ -0.94
PNKP-231ENST00000640501 FBXO28Q9NVF7 368 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 GGA3Q9NZ52 723 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 LARSQ9P2J5 1176 aaKnown RBP9.18□□□□□ -0.94
PNKP-231ENST00000640501 FBXO40Q9UH90 709 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 TRAF3IP3Q9Y228 551 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 SAMM50Q9Y512 469 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 CSADQ9Y600 493 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 ADGRG1Q9Y653 693 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 EPN1Q9Y6I3 576 aaPredicted RBP9.18□□□□□ -0.94
PNKP-231ENST00000640501 ZHX2Q9Y6X8 837 aa9.18□□□□□ -0.94
PNKP-231ENST00000640501 ZNF536O15090 1300 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 ZNF541Q9H0D2 1346 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 TTC26A0AVF1 554 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 SOWAHDA6NJG2 315 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 WDR64B1ANS9 1081 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 USO1O60763 962 aaKnown RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 COBLO75128 1261 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 SLITRK3O94933 977 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 NDUFA10O95299 355 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 MAPTP10636 758 aaKnown RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 XRCC5P13010 732 aaKnown RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 SCP2P22307 547 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 NR2F2P24468 414 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 GUCY2CP25092 1073 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 DSG3P32926 999 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 COPB2P35606 906 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 IREB2P48200 963 aaKnown RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 SNRPFP62306 86 aaKnown RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 NFIL3Q16649 462 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 ZCWPW2Q504Y3 356 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 RINT1Q6NUQ1 792 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 DPY19L2Q6NUT2 758 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 ZNF662Q6ZS27 426 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 TOGARAM2Q6ZUX3 1019 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 OTUD6AQ7L8S5 288 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 KIAA1328Q86T90 577 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 CDAN1Q8IWY9 1227 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 FAM178BQ8IXR5 827 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 MYCT1Q8N699 235 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 SYTL5Q8TDW5 730 aaPredicted RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 NSUN6Q8TEA1 469 aaKnown RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 CLEC4DQ8WXI8 215 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 SYN2Q92777 582 aaPredicted RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 GPRASP2Q96D09 838 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 CCDC42Q96M95 316 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 DRC1Q96MC2 740 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 GLIS2Q9BZE0 524 aaPredicted RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 DEF6Q9H4E7 631 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 TMEM206Q9H813 350 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 ACAD9Q9H845 621 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 MMRN2Q9H8L6 949 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 L2HGDHQ9H9P8 463 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 KCNH7Q9NS40 1196 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 RNF146Q9NTX7 359 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 ARGLU1Q9NWB6 273 aaPredicted RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 ARMCX3Q9UH62 379 aaPredicted RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 DBR1Q9UK59 544 aaKnown RBP9.17□□□□□ -0.94
PNKP-231ENST00000640501 UBIAD1Q9Y5Z9 338 aa9.17□□□□□ -0.94
PNKP-231ENST00000640501 PFASO15067 1338 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 CTAGE9A4FU28 777 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 EIF3CLB5ME19 914 aaKnown RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 NFIBO00712 420 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 URI1O94763 535 aaPredicted RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 LYPLA2O95372 231 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 QARSP47897 775 aaKnown RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 RPS6P62753 249 aaKnown RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 GOLGA8FQ08AF8 430 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 GOLGA8DPQ0D2H9 430 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 CETN1Q12798 172 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 KIF5AQ12840 1032 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 CTTNQ14247 550 aaKnown RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 MYBPC2Q14324 1141 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 PGM5Q15124 567 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 LRRC41Q15345 812 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 MEA1Q16626 185 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 SLC9C1Q4G0N8 1177 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 ARSHQ5FYA8 562 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 MIIPQ5JXC2 388 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 SNRNP48Q6IEG0 339 aaKnown RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 ZNF746Q6NUN9 644 aaPredicted RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 NSMFQ6X4W1 530 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 LRRC55Q6ZSA7 311 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 SFR1Q86XK3 245 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 NELFCDQ8IXH7 590 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 ZC3H3Q8IXZ2 948 aaKnown RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 SMAP1Q8IYB5 467 aaPredicted RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 CEP112Q8N8E3 955 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 SCFD1Q8WVM8 642 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 ATP6V0A1Q93050 837 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 HPS3Q969F9 1004 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 GJA10Q969M2 543 aa9.16□□□□□ -0.94
PNKP-231ENST00000640501 P2RX7Q99572 595 aaKnown RBP9.16□□□□□ -0.94
PNKP-231ENST00000640501 EIF3CQ99613 913 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms