RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 GRK3P35626 688 aa5.94□□□□□ -1.46
AP3S1-209ENST00000640413 SPIRE1Q08AE8 756 aa5.94□□□□□ -1.46
AP3S1-209ENST00000640413 TOP3AQ13472 1001 aaPredicted RBP5.94□□□□□ -1.46
AP3S1-209ENST00000640413 MAMDC4Q6UXC1 1216 aa5.94□□□□□ -1.46
AP3S1-209ENST00000640413 ZNF808Q8N4W9 903 aaPredicted RBP5.94□□□□□ -1.46
AP3S1-209ENST00000640413 TGIF2Q9GZN2 237 aa5.94□□□□□ -1.46
AP3S1-209ENST00000640413 PDGFDQ9GZP0 370 aaPredicted RBP5.94□□□□□ -1.46
AP3S1-209ENST00000640413 DSEQ9UL01 958 aa5.94□□□□□ -1.46
AP3S1-209ENST00000640413 SLC30A1Q9Y6M5 507 aa5.94□□□□□ -1.46
AP3S1-209ENST00000640413 A0A087X1B8 175 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 A0A1W2PQU0 124 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 GJB6O95452 261 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 PURAQ00577 322 aaKnown RBP5.93□□□□□ -1.46
AP3S1-209ENST00000640413 FXNQ16595 210 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 SLC10A6Q3KNW5 377 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 TNNI3KQ59H18 835 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 HABP4Q5JVS0 413 aaKnown RBP5.93□□□□□ -1.46
AP3S1-209ENST00000640413 LBX2Q6XYB7 198 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 FAM89AQ96GI7 184 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 PLA2G12BQ9BX93 195 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 C12orf65Q9H3J6 166 aaKnown RBP5.93□□□□□ -1.46
AP3S1-209ENST00000640413 NR2E1Q9Y466 385 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 NUB1Q9Y5A7 615 aa5.93□□□□□ -1.46
AP3S1-209ENST00000640413 MATN2O00339 956 aa5.92□□□□□ -1.46
AP3S1-209ENST00000640413 SSBP05455 408 aaKnown RBP eCLIP5.92□□□□□ -1.46
AP3S1-209ENST00000640413 ETFBP38117 255 aa5.92□□□□□ -1.46
AP3S1-209ENST00000640413 NANOS3P60323 173 aaKnown RBP5.92□□□□□ -1.46
AP3S1-209ENST00000640413 DUSP8Q13202 625 aa5.92□□□□□ -1.46
AP3S1-209ENST00000640413 TBR1Q16650 682 aa5.92□□□□□ -1.46
AP3S1-209ENST00000640413 RSPO2Q6UXX9 243 aaPredicted RBP5.92□□□□□ -1.46
AP3S1-209ENST00000640413 KCTD1Q719H9 257 aa5.92□□□□□ -1.46
AP3S1-209ENST00000640413 EEPD1Q7L9B9 569 aa5.92□□□□□ -1.46
AP3S1-209ENST00000640413 CACTINQ8WUQ7 758 aaKnown RBP5.92□□□□□ -1.46
AP3S1-209ENST00000640413 CD244Q9BZW8 370 aa5.92□□□□□ -1.46
AP3S1-209ENST00000640413 CCSER2Q9H7U1 834 aa5.92□□□□□ -1.46
AP3S1-209ENST00000640413 AGRPO00253 132 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 CUTAO60888 179 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 ACRV1P26436 265 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 EPHA5P54756 1037 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 INHBCP55103 352 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 KIZQ2M2Z5 673 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 ZMAT1Q5H9K5 638 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 FNDC7Q5VTL7 733 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 MMRN2Q9H8L6 949 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 PRKAG3Q9UGI9 489 aa5.91□□□□□ -1.46
AP3S1-209ENST00000640413 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.9□□□□□ -1.46
AP3S1-209ENST00000640413 U2SURPO15042 1029 aaKnown RBP5.9□□□□□ -1.46
AP3S1-209ENST00000640413 DBPQ10586 325 aaPredicted RBP5.9□□□□□ -1.46
AP3S1-209ENST00000640413 FOXL1Q12952 345 aa5.9□□□□□ -1.46
AP3S1-209ENST00000640413 NTRK3Q16288 839 aa5.9□□□□□ -1.46
AP3S1-209ENST00000640413 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
AP3S1-209ENST00000640413 LDLRAD3Q86YD5 345 aa5.9□□□□□ -1.46
AP3S1-209ENST00000640413 SH3RF2Q8TEC5 729 aa5.9□□□□□ -1.46
AP3S1-209ENST00000640413 DCAF4Q8WV16 495 aa5.9□□□□□ -1.46
AP3S1-209ENST00000640413 LARP4BQ92615 738 aaKnown RBP5.9□□□□□ -1.46
AP3S1-209ENST00000640413 EPN3Q9H201 632 aa5.9□□□□□ -1.46
AP3S1-209ENST00000640413 BLACEA4D250 179 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 SOD2P04179 222 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 HIBADHP31937 336 aaKnown RBP5.89□□□□□ -1.47
AP3S1-209ENST00000640413 MSX2P35548 267 aaPredicted RBP5.89□□□□□ -1.47
AP3S1-209ENST00000640413 MFAP1P55081 439 aaKnown RBP5.89□□□□□ -1.47
AP3S1-209ENST00000640413 TUBA3CQ13748 450 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 WDR72Q3MJ13 1102 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 TUBA3EQ6PEY2 450 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 DPP8Q6V1X1 898 aaPredicted RBP5.89□□□□□ -1.47
AP3S1-209ENST00000640413 LARP4Q71RC2 724 aaKnown RBP eCLIP5.89□□□□□ -1.47
AP3S1-209ENST00000640413 DNAJC10Q8IXB1 793 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 SCYL1Q96KG9 808 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 IPPKQ9H8X2 491 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 TLR9Q9NR96 1032 aa5.89□□□□□ -1.47
AP3S1-209ENST00000640413 TCRBV5S4A2TA0A5A2 114 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 ARHGAP6O43182 974 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 PRODHO43272 600 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 ADCY8P40145 1251 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 ETV4P43268 484 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 KCNQ1P51787 676 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 GPR85P60893 370 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 BTBD8Q5XKL5 378 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 CFHR4Q92496 578 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 MRRFQ96E11 262 aaKnown RBP5.88□□□□□ -1.47
AP3S1-209ENST00000640413 ZDHHC5Q9C0B5 715 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 CAPN10Q9HC96 672 aa5.88□□□□□ -1.47
AP3S1-209ENST00000640413 FAM90A27PA6NNH2 459 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 ADH4P08319 380 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 PDE6AP16499 860 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 NFYCQ13952 458 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 HSP90AA2PQ14568 343 aaPredicted RBP5.87□□□□□ -1.47
AP3S1-209ENST00000640413 ZNF627Q7L945 461 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 IFNL3Q8IZI9 196 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 ZNF483Q8TF39 744 aaPredicted RBP5.87□□□□□ -1.47
AP3S1-209ENST00000640413 ZG16BQ96DA0 208 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 ST7Q9NRC1 585 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 RIC8BQ9NVN3 520 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 ARHGAP28Q9P2N2 729 aa5.87□□□□□ -1.47
AP3S1-209ENST00000640413 PUF60Q9UHX1 559 aaKnown RBP5.87□□□□□ -1.47
AP3S1-209ENST00000640413 FAM47E-STBD1D6RA91 191 aa5.86□□□□□ -1.47
AP3S1-209ENST00000640413 HMGCRP04035 888 aa5.86□□□□□ -1.47
AP3S1-209ENST00000640413 RPS19P39019 145 aaKnown RBP5.86□□□□□ -1.47
AP3S1-209ENST00000640413 IL13RA1P78552 427 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms