RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ABT1Q9ULW3 272 aaKnown RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 ABCB11O95342 1321 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 CCDC189A1A4V9 331 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 CCDC85CA6NKD9 419 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 BTBD19C9JJ37 291 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 ATP2A1O14983 1001 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 MRPL12P52815 198 aaKnown RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 HERVK_113P62684 666 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 DNM1Q05193 864 aaKnown RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 TMEM132BQ14DG7 1078 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 EARS2Q5JPH6 523 aaKnown RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 LBX2Q6XYB7 198 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 REXO1Q8N1G1 1221 aaKnown RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 CUL5Q93034 780 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 HHIPL1Q96JK4 782 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 SCYL1Q96KG9 808 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 P2RX7Q99572 595 aaKnown RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 OSBPL7Q9BZF2 842 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 GLT8D2Q9H1C3 349 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 LRFN2Q9ULH4 789 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 PCDHA6Q9UN73 950 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 SLC45A1Q9Y2W3 748 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 CTDP1Q9Y5B0 961 aaPredicted RBP9.04□□□□□ -0.96
SCARB2-220ENST00000640076 PCDHA8Q9Y5H6 950 aa9.04□□□□□ -0.96
SCARB2-220ENST00000640076 POTEFA5A3E0 1075 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 FAM205CA6NFA0 338 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-220ENST00000640076 GIPC1O14908 333 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 EPHA4P54764 986 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 GPR153Q6NV75 609 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 ANKRD23Q86SG2 305 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 MB21D1Q8N884 522 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 TEX13BQ9BXU2 312 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 EFR3BQ9Y2G0 817 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 MRPL11Q9Y3B7 192 aaKnown RBP9.03□□□□□ -0.96
SCARB2-220ENST00000640076 MANSC4A6NHS7 340 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-220ENST00000640076 PDHXO00330 501 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 MEIS2O14770 477 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 ALAS1P13196 640 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 NOS2P35228 1153 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 UBE2SQ16763 222 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 ATL3Q6DD88 541 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 PIK3AP1Q6ZUJ8 805 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 WDR75Q8IWA0 830 aaKnown RBP9.03□□□□□ -0.96
SCARB2-220ENST00000640076 FAM43AQ8N2R8 423 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 CLEC4DQ8WXI8 215 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 PTPN18Q99952 460 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 CCDC113Q9H0I3 377 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 KBTBD4Q9NVX7 518 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 CNPY2Q9Y2B0 182 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 MSRB2Q9Y3D2 182 aa9.03□□□□□ -0.96
SCARB2-220ENST00000640076 PDGFAP04085 211 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 CYP2C8P10632 490 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 TOB1P50616 345 aaPredicted RBP9.02□□□□□ -0.97
SCARB2-220ENST00000640076 KRT85P78386 507 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 BRDTQ58F21 947 aaPredicted RBP9.02□□□□□ -0.97
SCARB2-220ENST00000640076 RILPL1Q5EBL4 403 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 JAKMIP3Q5VZ66 844 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 SNRNP48Q6IEG0 339 aaKnown RBP9.02□□□□□ -0.97
SCARB2-220ENST00000640076 USP17L6PQ6QN14 398 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 MAMSTRQ6ZN01 415 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 SH3RF1Q7Z6J0 888 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 ZNF396Q96N95 335 aaPredicted RBP9.02□□□□□ -0.97
SCARB2-220ENST00000640076 USP28Q96RU2 1077 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 NUDT12Q9BQG2 462 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 FTOQ9C0B1 505 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCARB2-220ENST00000640076 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 RIPK3Q9Y572 518 aa9.02□□□□□ -0.97
SCARB2-220ENST00000640076 RBBP6Q7Z6E9 1792 aaKnown RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 NFIBO00712 420 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 BACH1O14867 736 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 FIBPO43427 364 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 PEX10O60683 326 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 CNMDO75829 334 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 MCM4P33991 863 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 STAT3P40763 770 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 CDKN1CP49918 316 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 GHRHRQ02643 423 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 PLS1Q14651 629 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 MUM1L1Q5H9M0 696 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 TBC1D5Q92609 795 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 THAP11Q96EK4 314 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 C2orf49Q9BVC5 232 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 TXNRD2Q9NNW7 524 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 RNF146Q9NTX7 359 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 RBPJLQ9UBG7 517 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 CFAP45Q9UL16 551 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 MYH7BA7E2Y1 1941 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 GCOM1H8Y6P7 765 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 IGF2BP3O00425 579 aaKnown RBP eCLIP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 CLGNO14967 610 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 CAND2O75155 1236 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 CFBP00751 764 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 MYCP01106 439 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 POLR2MP0CAP2 368 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 LIG1P18858 919 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 HOXA13P31271 388 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms