RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 CERKQ8TCT0 537 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 SPAG5Q96R06 1193 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 GANQ9H2C0 597 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 AJAP1Q9UKB5 411 aaPredicted RBP19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 SMCHD1A6NHR9 2005 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 CETN3O15182 167 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 BBOX1O75936 387 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 EEF2P13639 858 aaKnown RBP19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 HOXA13P31271 388 aaPredicted RBP19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 HOXD13P35453 343 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 CDC37Q16543 378 aaPredicted RBP19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 MEI1Q5TIA1 1274 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 EMBQ6PCB8 327 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 CASKIN2Q8WXE0 1202 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 CEP63Q96MT8 703 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 REEP2Q9BRK0 252 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 DHX36Q9H2U1 1008 aaKnown RBP19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 KDM3AQ9Y4C1 1321 aa19.63■□□□□ 0.73
CROCCP2-204ENST00000639456 TAF1LQ8IZX4 1826 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 UBAP1LF5GYI3 381 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 RAD51CO43502 376 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 POLD1P28340 1107 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 IKQ13123 557 aaPredicted RBP19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 GPATCH4Q5T3I0 446 aaKnown RBP19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 SH3GL2Q99962 352 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 AP1M1Q9BXS5 423 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 EDEM3Q9BZQ6 932 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 TSPYL1Q9H0U9 437 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 KCNMB3Q9NPA1 279 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 USP21Q9UK80 565 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 GRIN2DO15399 1336 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 MEIS2O14770 477 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 ZEB2O60315 1214 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 SHOX2O60902 331 aaPredicted RBP19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 PPFIA1Q13136 1202 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 DDX42Q86XP3 938 aaKnown RBP eCLIP19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 IFT20Q8IY31 132 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 RBM46Q8TBY0 533 aaKnown RBP19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 ZC3H12CQ9C0D7 883 aaKnown RBP19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 PODXL2Q9NZ53 605 aa19.62■□□□□ 0.73
CROCCP2-204ENST00000639456 ZNF233A6NK53 670 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 FAM86B1E9PN63 330 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 FAM86B2P0C5J1 330 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 UCHL3P15374 230 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 GIT2Q14161 759 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 INPP4AQ96PE3 977 aaPredicted RBP19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 AKAP3O75969 853 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 GDF11O95390 407 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 GCFC2P16383 781 aaKnown RBP19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 ARHGAP4P98171 946 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 NNTQ13423 1086 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 HYIQ5T013 277 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 PPP1R18Q6NYC8 613 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 IRF2BP2Q7Z5L9 587 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 ARMCX3Q9UH62 379 aaPredicted RBP19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 PCDHGC5Q9Y5F6 944 aa19.61■□□□□ 0.73
CROCCP2-204ENST00000639456 PPEF1O14829 653 aaPredicted RBP19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 SEPT2Q15019 361 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 APOBEC3HQ6NTF7 200 aaKnown RBP19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 PACS2Q86VP3 889 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 KIAA0825Q8IV33 1275 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 KSR1Q8IVT5 923 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 CENPHQ9H3R5 247 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 GDF3Q9NR23 364 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 RGL1Q9NZL6 768 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 AIPL1Q9NZN9 384 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 PCDHB13Q9Y5F0 798 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 DDTLA6NHG4 134 aaPredicted RBP19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 GOLGA8KD6RF30 607 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 ZBTB39O15060 712 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 OPA1O60313 960 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 SPATA31C1P0DKV0 1188 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 CORO7P57737 925 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 SPIRE1Q08AE8 756 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 HLTFQ14527 1009 aaKnown RBP eCLIP19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 CFAP58Q5T655 872 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 SYN2Q92777 582 aaPredicted RBP19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 CAVIN3Q969G5 261 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 NUCKS1Q9H1E3 243 aaKnown RBP19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 BHMT2Q9H2M3 363 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 DBNDD1Q9H9R9 158 aa19.6■□□□□ 0.73
CROCCP2-204ENST00000639456 CEP104O60308 925 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 GNA14O95837 355 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 HLA-DOAP06340 250 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 PON1P27169 355 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 RBM5P52756 815 aaKnown RBP eCLIP19.59■□□□□ 0.734e-11■■■□□ 15.5
CROCCP2-204ENST00000639456 EXOC3L4Q17RC7 722 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 SLFN13Q68D06 897 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 PIGOQ8TEQ8 1089 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 LUC7LQ9NQ29 371 aaKnown RBP19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 TMCO5BA8MYB1 307 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 G3V3G9 751 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 GUCY1A3Q02108 690 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 DCAF8Q5TAQ9 597 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 USP38Q8NB14 1042 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 OR2W6PQ8NHA6 318 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 PIK3R5Q8WYR1 880 aa19.59■□□□□ 0.73
CROCCP2-204ENST00000639456 EIF3HO15372 352 aaKnown RBP eCLIP19.58■□□□□ 0.732e-8■□□□□ 9.9
CROCCP2-204ENST00000639456 GCNT3O95395 438 aa19.58■□□□□ 0.73
CROCCP2-204ENST00000639456 MARSP56192 900 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms