RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 H0YCG3 227 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 TADA3O75528 432 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 IFT88Q13099 833 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 FYB2Q5VWT5 728 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 APBB1IPQ7Z5R6 666 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-216ENST00000639300 BANK1Q8NDB2 785 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 TBC1D16Q8TBP0 767 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 NRBP2Q9NSY0 501 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 MTMR4Q9NYA4 1195 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 ASNSP08243 561 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 ATF2P15336 505 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 GCLMP48507 274 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 BFSP1Q12934 665 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 NR1I3Q14994 352 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 EAPPQ56P03 285 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-216ENST00000639300 ARHGAP27Q6ZUM4 889 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 PALM2Q8IXS6 379 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 ADSSL1Q8N142 457 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 MXD3Q9BW11 206 aa15.65■□□□□ 0.1
SCARB2-216ENST00000639300 GOLGA8SH3BPF8 625 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 TNNC2P02585 160 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 HNRNPH2P55795 449 aaKnown RBP15.64■□□□□ 0.09
SCARB2-216ENST00000639300 FGGP02679 453 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 ATP1A1P05023 1023 aaKnown RBP15.64■□□□□ 0.09
SCARB2-216ENST00000639300 OSTNP61366 133 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 SBK1Q52WX2 424 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 CCDC93Q567U6 631 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 PRR5LQ6MZQ0 368 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 TMED8Q6PL24 325 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-216ENST00000639300 CCDC13Q8IYE1 715 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 PROM2Q8N271 834 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 DCAF4Q8WV16 495 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 DYDC2Q96IM9 177 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 SH2D3AQ9BRG2 576 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 SPZ1Q9BXG8 430 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 RGL1Q9NZL6 768 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 OVOS2A0A0G2JMS6 1433 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 POC1B-GALNT4F8VUJ3 575 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 RASA1P20936 1047 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 CA8P35219 290 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 BPIFB4P59827 614 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 APBA1Q02410 837 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 NAA25Q14CX7 972 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 TRIP13Q15645 432 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-216ENST00000639300 CEP72Q9P209 647 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 NXF1Q9UBU9 619 aaKnown RBP15.64■□□□□ 0.09
SCARB2-216ENST00000639300 TRIM10Q9UDY6 481 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 STK38LQ9Y2H1 464 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 MRFAP1Q9Y605 127 aa15.64■□□□□ 0.09
SCARB2-216ENST00000639300 AFF2P51816 1311 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 TFAMQ00059 246 aaKnown RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 ITIH3Q06033 890 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 SGO2Q562F6 1265 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 BRDTQ58F21 947 aaPredicted RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 TTLL6Q8N841 843 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 PREX1Q8TCU6 1659 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 INTS9Q9NV88 658 aaKnown RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 DNAJC17Q9NVM6 304 aaKnown RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 NOD1Q9Y239 953 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 ECE2O60344 883 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 RNF8O76064 485 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 KCNB1Q14721 858 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 KNOP1Q1ED39 458 aaKnown RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 CCDC14Q49A88 953 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 SULF1Q8IWU6 871 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 ARHGEF2Q92974 986 aaKnown RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 PBKQ96KB5 322 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 CEP63Q96MT8 703 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 FAM114A2Q9NRY5 505 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 VWDEQ8N2E2 1590 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 MEGF6O75095 1541 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 PXDNQ92626 1479 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 FLT1P17948 1338 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 VGLL3A8MV65 326 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 ADRA2BP18089 450 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 CASP7P55210 303 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 FAM160B2Q86V87 743 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 FAM20AQ96MK3 541 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 LIMA1Q9UHB6 759 aaKnown RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 DIP2BQ9P265 1576 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 CNTNAP5Q8WYK1 1306 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 HADHQ16836 314 aaKnown RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 PDXDC2PQ6P474 469 aa15.63■□□□□ 0.09
SCARB2-216ENST00000639300 RRP15Q9Y3B9 282 aaKnown RBP15.63■□□□□ 0.09
SCARB2-216ENST00000639300 CD58P19256 250 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 CAPN11Q9UMQ6 739 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 NOVA2Q9UNW9 492 aaKnown RBP15.62■□□□□ 0.09
SCARB2-216ENST00000639300 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-216ENST00000639300 TRIM49P0CI25 452 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 TRIM49CP0CI26 452 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 COL9A3Q14050 684 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-216ENST00000639300 PADI6Q6TGC4 694 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 GRK7Q8WTQ7 553 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 RMDN3Q96TC7 470 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 RAVER2Q9HCJ3 691 aaKnown RBP15.62■□□□□ 0.09
SCARB2-216ENST00000639300 NPHP3-ACAD11A0A0J9YXS1 232 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 A0A1W2PQC6 194 aa15.62■□□□□ 0.09
SCARB2-216ENST00000639300 POLR2BP30876 1174 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms