RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 TRIM71Q2Q1W2 868 aaKnown RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 KIAA1211LQ6NV74 962 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 C15orf39Q6ZRI6 1047 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 CEP68Q76N32 757 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 MRPL50Q8N5N7 158 aaKnown RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 SPATA20Q8TB22 786 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 SNRNP27Q8WVK2 155 aaKnown RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 USP26Q9BXU7 913 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 IRX2Q9BZI1 471 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 ARRDC1-AS1Q9H2J1 176 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 VTA1Q9NP79 307 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 FBXO40Q9UH90 709 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 ITPR3Q14573 2671 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 ZMYM2Q9UBW7 1377 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 IL16Q14005 1332 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 SHISA7A6NL88 538 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 PPP1R3GB7ZBB8 358 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 H7C1W4 665 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 NARSO43776 548 aaKnown RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 EIF2S2P20042 333 aaKnown RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 PRKAR2BP31323 418 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 LMAN2Q12907 356 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 CAMK2BQ13554 666 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 GIT2Q14161 759 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 BTG3Q14201 252 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 GCKRQ14397 625 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 AMHR2Q16671 573 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 RTL5Q5HYW3 569 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 SLC4A10Q6U841 1118 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 ATF7IPQ6VMQ6 1270 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 ARMCX2Q7L311 632 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 GPR149Q86SP6 731 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 CCDC85AQ96PX6 553 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-213ENST00000639290 FEZ1Q99689 392 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 FOXQ1Q9C009 403 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 SFXN1Q9H9B4 322 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 DKK3Q9UBP4 350 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 VPS13AQ96RL7 3174 aa4.33□□□□□ -1.72
CCDC7-213ENST00000639290 PLXNA4Q9HCM2 1894 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 CACNA1IQ9P0X4 2223 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 FAM170BA6NMN3 283 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 BHMG1C9JSJ3 638 aaPredicted RBP4.32□□□□□ -1.72
CCDC7-213ENST00000639290 TAF5LO75529 589 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 C1RP00736 705 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 PLCB3Q01970 1234 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 PTPN14Q15678 1187 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 TYW1BQ6NUM6 668 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 C1orf228Q6PIY5 440 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 KLHL23Q8NBE8 558 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 GAB3Q8WWW8 586 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 CDCA7LQ96GN5 454 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 MSANTD3Q96H12 275 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 PHACTR3Q96KR7 559 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 CREBBPQ92793 2442 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 PCNX1Q96RV3 2341 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 MAN2B1O00754 1011 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 ATP2A1O14983 1001 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 LDHBP07195 334 aaKnown RBP4.32□□□□□ -1.72
CCDC7-213ENST00000639290 EIF2S3P41091 472 aaKnown RBP4.32□□□□□ -1.72
CCDC7-213ENST00000639290 GYG1P46976 350 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 CHAF1AQ13111 956 aaPredicted RBP4.32□□□□□ -1.72
CCDC7-213ENST00000639290 BMS1Q14692 1282 aaKnown RBP4.32□□□□□ -1.72
CCDC7-213ENST00000639290 ZC3H18Q86VM9 953 aaKnown RBP4.32□□□□□ -1.72
CCDC7-213ENST00000639290 PPFIBP1Q86W92 1011 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 PARP9Q8IXQ6 854 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 DEFB124Q8NES8 71 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 SNIP1Q8TAD8 396 aaKnown RBP4.32□□□□□ -1.72
CCDC7-213ENST00000639290 DHX38Q92620 1227 aaKnown RBP4.32□□□□□ -1.72
CCDC7-213ENST00000639290 CDHR5Q9HBB8 845 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 PCDHB12Q9Y5F1 795 aa4.32□□□□□ -1.72
CCDC7-213ENST00000639290 SMG1Q96Q15 3661 aaKnown RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 MYH2Q9UKX2 1941 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 RBM47A0AV96 593 aaKnown RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 FRAT2O75474 233 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 DGKIO75912 1065 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 RHOBTB1O94844 696 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 PGK2P07205 417 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 GRNP28799 593 aaKnown RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 SIM1P81133 766 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 SEMA3BQ13214 749 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 IFIT5Q13325 482 aaKnown RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 DUSP28Q4G0W2 176 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 ELMSAN1Q6PJG2 1045 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 TMPRSS7Q7RTY8 843 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 GLRX5Q86SX6 157 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 RBM23Q86U06 439 aaKnown RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 DBF4BQ8NFT6 615 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 EPAS1Q99814 870 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 LRRC4CQ9HCJ2 640 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 PUF60Q9UHX1 559 aaKnown RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 APOBEC2Q9Y235 224 aaKnown RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 DLG5Q8TDM6 1919 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 NRCAMQ92823 1304 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 MYO16Q9Y6X6 1858 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 DYNC1LI2O43237 492 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 SFTPCP11686 197 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 CXCL12P48061 93 aa4.31□□□□□ -1.72
CCDC7-213ENST00000639290 MLLT6P55198 1093 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-213ENST00000639290 KARSQ15046 597 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms